RNA–Protein interactions for RNA: ENST00000558729.5

PKNOX2-210, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-210ENST00000558729 USP44Q9H0E7 712 aa20.75■□□□□ 0.91
PKNOX2-210ENST00000558729 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
PKNOX2-210ENST00000558729 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 BBOX1O75936 387 aa20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 YBX3P16989 372 aaKnown RBP eCLIP20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 GRAPQ13588 217 aa20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 CC2D2BQ6DHV5 1058 aa20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 GRAPLQ8TC17 118 aaPredicted RBP20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
PKNOX2-210ENST00000558729 CSF1RP07333 972 aa20.73■□□□□ 0.91
PKNOX2-210ENST00000558729 GNAI3P08754 354 aa20.73■□□□□ 0.91
PKNOX2-210ENST00000558729 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
PKNOX2-210ENST00000558729 TTLL11Q8NHH1 800 aa20.73■□□□□ 0.91
PKNOX2-210ENST00000558729 TMX4Q9H1E5 349 aaPredicted RBP20.73■□□□□ 0.91
PKNOX2-210ENST00000558729 NBPF7P0C2Y1 421 aaPredicted RBP20.72■□□□□ 0.91
PKNOX2-210ENST00000558729 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
PKNOX2-210ENST00000558729 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
PKNOX2-210ENST00000558729 PDE3AQ14432 1141 aa20.71■□□□□ 0.91
PKNOX2-210ENST00000558729 TMEM57Q8N5G2 664 aa20.71■□□□□ 0.91
PKNOX2-210ENST00000558729 C7orf43Q8WVR3 580 aa20.71■□□□□ 0.91
PKNOX2-210ENST00000558729 CDC5LQ99459 802 aaKnown RBP20.71■□□□□ 0.91
PKNOX2-210ENST00000558729 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
PKNOX2-210ENST00000558729 FOXO4P98177 505 aa20.7■□□□□ 0.9
PKNOX2-210ENST00000558729 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
PKNOX2-210ENST00000558729 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 RTKN2Q8IZC4 609 aa20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 CHMP4BQ9H444 224 aaKnown RBP20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 TNNQ9UQP3 1299 aa20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
PKNOX2-210ENST00000558729 C21orf2O43822 256 aa20.68■□□□□ 0.9
PKNOX2-210ENST00000558729 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
PKNOX2-210ENST00000558729 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
PKNOX2-210ENST00000558729 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
PKNOX2-210ENST00000558729 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
PKNOX2-210ENST00000558729 RLBP1P12271 317 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 ITGA6P23229 1130 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 IFIT5Q13325 482 aaKnown RBP20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 IFFO2Q5TF58 517 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 SP8Q8IXZ3 490 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 MEIS3Q99687 375 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 GREM2Q9H772 168 aa20.67■□□□□ 0.9
PKNOX2-210ENST00000558729 ANKRD18BA2A2Z9 1011 aa20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 KAZALD1Q96I82 304 aa20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 CCDC85AQ96PX6 553 aaPredicted RBP20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 BICC1Q9H694 974 aaKnown RBP20.66■□□□□ 0.9
PKNOX2-210ENST00000558729 MYH3P11055 1940 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 SLX4Q8IY92 1834 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 PLIN1O60240 522 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
PKNOX2-210ENST00000558729 GNAI2P04899 355 aa20.64■□□□□ 0.89
PKNOX2-210ENST00000558729 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.89
PKNOX2-210ENST00000558729 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
PKNOX2-210ENST00000558729 ZNF219Q9P2Y4 722 aaPredicted RBP20.64■□□□□ 0.89
PKNOX2-210ENST00000558729 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
PKNOX2-210ENST00000558729 ANKRD44Q8N8A2 993 aa20.63■□□□□ 0.89
PKNOX2-210ENST00000558729 TAOK3Q9H2K8 898 aa20.63■□□□□ 0.89
PKNOX2-210ENST00000558729 BSDC1Q9NW68 430 aaPredicted RBP20.63■□□□□ 0.89
PKNOX2-210ENST00000558729 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
PKNOX2-210ENST00000558729 TAF7LQ5H9L4 462 aa20.62■□□□□ 0.89
PKNOX2-210ENST00000558729 PSMD1Q99460 953 aa20.62■□□□□ 0.89
PKNOX2-210ENST00000558729 MPHOSPH8Q99549 860 aa20.62■□□□□ 0.89
PKNOX2-210ENST00000558729 LRRFIP2Q9Y608 721 aaKnown RBP20.62■□□□□ 0.89
PKNOX2-210ENST00000558729 SUPT20HQ8NEM7 779 aa20.61■□□□□ 0.89
PKNOX2-210ENST00000558729 NFKBIEO00221 500 aa20.6■□□□□ 0.89
PKNOX2-210ENST00000558729 MTX1Q13505 466 aa20.6■□□□□ 0.89
PKNOX2-210ENST00000558729 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
PKNOX2-210ENST00000558729 SNED1Q8TER0 1413 aa20.6■□□□□ 0.89
PKNOX2-210ENST00000558729 DPP8Q6V1X1 898 aaPredicted RBP20.59■□□□□ 0.89
PKNOX2-210ENST00000558729 MPNDQ8N594 471 aa20.59■□□□□ 0.89
PKNOX2-210ENST00000558729 VPS33BQ9H267 617 aa20.59■□□□□ 0.89
PKNOX2-210ENST00000558729 LMNB1P20700 586 aa20.58■□□□□ 0.89
PKNOX2-210ENST00000558729 OLFM4Q6UX06 510 aa20.58■□□□□ 0.89
PKNOX2-210ENST00000558729 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
PKNOX2-210ENST00000558729 ANKRD2Q9GZV1 360 aa20.58■□□□□ 0.89
PKNOX2-210ENST00000558729 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
PKNOX2-210ENST00000558729 CACNA1SQ13698 1873 aa20.58■□□□□ 0.88
PKNOX2-210ENST00000558729 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
PKNOX2-210ENST00000558729 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
PKNOX2-210ENST00000558729 XDHP47989 1333 aa20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 C20orf194Q5TEA3 1177 aa20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 ZNF784Q8NCA9 323 aaPredicted RBP20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 MINPP1Q9UNW1 487 aa20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
PKNOX2-210ENST00000558729 ZC3H4Q9UPT8 1303 aaKnown RBP20.55■□□□□ 0.88
PKNOX2-210ENST00000558729 UTRNP46939 3433 aa20.55■□□□□ 0.88
PKNOX2-210ENST00000558729 RASSF7Q02833 373 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms