RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 GADD45BO75293 160 aaPredicted RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 MCM3P25205 808 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 TDO2P48775 406 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 LLPHQ9BRT6 129 aaKnown RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 TMX4Q9H1E5 349 aaPredicted RBP12.59□□□□□ -0.39
TMC3-202ENST00000558726 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
TMC3-202ENST00000558726 IDH1O75874 414 aaKnown RBP12.58□□□□□ -0.39
TMC3-202ENST00000558726 RPS6KB1P23443 525 aa12.58□□□□□ -0.39
TMC3-202ENST00000558726 METTL24Q5JXM2 366 aa12.58□□□□□ -0.39
TMC3-202ENST00000558726 ZHX1Q9UKY1 873 aaPredicted RBP12.58□□□□□ -0.39
TMC3-202ENST00000558726 PKP1Q13835 747 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 NUP133Q8WUM0 1156 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 ERICH4A6NGS2 130 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
TMC3-202ENST00000558726 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 CCDC148Q8NFR7 591 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
TMC3-202ENST00000558726 CPSF1Q10570 1443 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 AOPEPQ8N6M6 819 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 CWC25Q9NXE8 425 aaPredicted RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 CFAP65Q6ZU64 1925 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 HOXC9P31274 260 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 SYKP43405 635 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 SETBP1Q9Y6X0 1596 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 BIN1O00499 593 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 MAP9Q49MG5 647 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
TMC3-202ENST00000558726 NAPBQ9H115 298 aa12.57□□□□□ -0.4
TMC3-202ENST00000558726 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 SLC27A2O14975 620 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 KIF20AO95235 890 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
TMC3-202ENST00000558726 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
TMC3-202ENST00000558726 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 UBASH3AP57075 661 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
TMC3-202ENST00000558726 ZNF75DP51815 510 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
TMC3-202ENST00000558726 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
TMC3-202ENST00000558726 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
TMC3-202ENST00000558726 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMC3-202ENST00000558726 E9PCH4 1651 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
TMC3-202ENST00000558726 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
TMC3-202ENST00000558726 SPTLC2O15270 562 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 PTPDC1A2A3K4 754 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 STARD3NLO95772 234 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 CPA1P15085 419 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMC3-202ENST00000558726 TUBB4BP68371 445 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 MED14O60244 1454 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
TMC3-202ENST00000558726 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
TMC3-202ENST00000558726 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 IP6K1Q92551 441 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 GNG11P61952 73 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 MYO6Q9UM54 1294 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 H0YHG0 523 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 IFIT3O14879 490 aaKnown RBP12.54□□□□□ -0.4
TMC3-202ENST00000558726 EPS15P42566 896 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
TMC3-202ENST00000558726 CLSTN1O94985 981 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms