RNA–Protein interactions for RNA: ENST00000558485.1

NEO1-203, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-203ENST00000558485 SIRT2Q8IXJ6 389 aa12.84□□□□□ -0.35
NEO1-203ENST00000558485 CCDC85AQ96PX6 553 aaPredicted RBP12.84□□□□□ -0.35
NEO1-203ENST00000558485 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
NEO1-203ENST00000558485 CACNA1SQ13698 1873 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 MTX1Q13505 466 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 AAMPQ13685 434 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 LRP5O75197 1615 aa12.83□□□□□ -0.36
NEO1-203ENST00000558485 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
NEO1-203ENST00000558485 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
NEO1-203ENST00000558485 ATP8B2P98198 1209 aa12.82□□□□□ -0.36
NEO1-203ENST00000558485 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
NEO1-203ENST00000558485 GREM2Q9H772 168 aa12.82□□□□□ -0.36
NEO1-203ENST00000558485 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
NEO1-203ENST00000558485 BRCA1P38398 1863 aaKnown RBP12.81□□□□□ -0.36
NEO1-203ENST00000558485 PDE6BP35913 854 aa12.81□□□□□ -0.36
NEO1-203ENST00000558485 POLA2Q14181 598 aa12.81□□□□□ -0.36
NEO1-203ENST00000558485 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
NEO1-203ENST00000558485 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
NEO1-203ENST00000558485 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
NEO1-203ENST00000558485 A0A1B0GUL6 1792 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 SRGNP10124 158 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 ITGA6P23229 1130 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 CHRNA5P30532 468 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
NEO1-203ENST00000558485 KCNA3P22001 575 aa12.79□□□□□ -0.36
NEO1-203ENST00000558485 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
NEO1-203ENST00000558485 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
NEO1-203ENST00000558485 ZNF594Q96JF6 807 aaPredicted RBP12.79□□□□□ -0.36
NEO1-203ENST00000558485 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
NEO1-203ENST00000558485 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 IGHDP01880 384 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 NPR1P16066 1061 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
NEO1-203ENST00000558485 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
NEO1-203ENST00000558485 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
NEO1-203ENST00000558485 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
NEO1-203ENST00000558485 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
NEO1-203ENST00000558485 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
NEO1-203ENST00000558485 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 H0YIN7 160 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 DPEP1P16444 411 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 TGFB2P61812 414 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 STYK1Q6J9G0 422 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
NEO1-203ENST00000558485 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 NLGN2Q8NFZ4 835 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
NEO1-203ENST00000558485 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
NEO1-203ENST00000558485 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
NEO1-203ENST00000558485 GRAPQ13588 217 aa12.76□□□□□ -0.37
NEO1-203ENST00000558485 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
NEO1-203ENST00000558485 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
NEO1-203ENST00000558485 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
NEO1-203ENST00000558485 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
NEO1-203ENST00000558485 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
NEO1-203ENST00000558485 HMMRO75330 724 aa12.75□□□□□ -0.37
NEO1-203ENST00000558485 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
NEO1-203ENST00000558485 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
NEO1-203ENST00000558485 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
NEO1-203ENST00000558485 SIL1Q9H173 461 aa12.75□□□□□ -0.37
NEO1-203ENST00000558485 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
NEO1-203ENST00000558485 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
NEO1-203ENST00000558485 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
NEO1-203ENST00000558485 EYA2O00167 538 aa12.73□□□□□ -0.37
NEO1-203ENST00000558485 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
NEO1-203ENST00000558485 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
NEO1-203ENST00000558485 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
NEO1-203ENST00000558485 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
NEO1-203ENST00000558485 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
NEO1-203ENST00000558485 CNKSR1Q969H4 720 aa12.73□□□□□ -0.37
NEO1-203ENST00000558485 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
NEO1-203ENST00000558485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
NEO1-203ENST00000558485 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
NEO1-203ENST00000558485 KDM2BQ8NHM5 1336 aa12.72□□□□□ -0.37
NEO1-203ENST00000558485 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
NEO1-203ENST00000558485 BBOX1O75936 387 aa12.72□□□□□ -0.37
NEO1-203ENST00000558485 CIAO1O76071 339 aa12.72□□□□□ -0.37
NEO1-203ENST00000558485 SASH1O94885 1247 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms