RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ERICH2A1L162 156 aa18.16■□□□□ 0.5
AP4E1-202ENST00000558439 APOBRQ0VD83 1088 aa18.16■□□□□ 0.5
AP4E1-202ENST00000558439 FSIP1Q8NA03 581 aa18.16■□□□□ 0.5
AP4E1-202ENST00000558439 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
AP4E1-202ENST00000558439 GCKRQ14397 625 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 ISM2Q6H9L7 571 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 CDC37L1Q7L3B6 337 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 DNAJC25Q9H1X3 360 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 DDX19AQ9NUU7 478 aaKnown RBP18.15■□□□□ 0.5
AP4E1-202ENST00000558439 PPLO60437 1756 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 IFIT5Q13325 482 aaKnown RBP18.15■□□□□ 0.5
AP4E1-202ENST00000558439 SEC62Q99442 399 aaKnown RBP18.15■□□□□ 0.5
AP4E1-202ENST00000558439 CUL4AQ13619 759 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 CCDC144CPQ8IYA2 1237 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 CCDC34Q96HJ3 373 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 C8orf76Q96K31 380 aa18.15■□□□□ 0.5
AP4E1-202ENST00000558439 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
AP4E1-202ENST00000558439 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 PDILTQ8N807 584 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 ZNF594Q96JF6 807 aaPredicted RBP18.14■□□□□ 0.49
AP4E1-202ENST00000558439 CLIP2Q9UDT6 1046 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 JAK2O60674 1132 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 LARGE1O95461 756 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
AP4E1-202ENST00000558439 CCDC186Q7Z3E2 898 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 HS1BP3Q53T59 392 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 TMOD3Q9NYL9 352 aa18.14■□□□□ 0.49
AP4E1-202ENST00000558439 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 TYRO3Q06418 890 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
AP4E1-202ENST00000558439 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 HMGB1P09429 215 aaKnown RBP18.13■□□□□ 0.49
AP4E1-202ENST00000558439 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 FAM200AQ8TCP9 573 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
AP4E1-202ENST00000558439 TRMT1Q9NXH9 659 aaKnown RBP18.13■□□□□ 0.49
AP4E1-202ENST00000558439 RPS6KB1P23443 525 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 A1BGP04217 495 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
AP4E1-202ENST00000558439 PRDM10Q9NQV6 1147 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 ZNF213O14771 459 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 PDCL3Q9H2J4 239 aa18.12■□□□□ 0.49
AP4E1-202ENST00000558439 CRB1P82279 1406 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 NEURL1BA8MQ27 555 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 MTERF4Q7Z6M4 381 aaKnown RBP18.11■□□□□ 0.49
AP4E1-202ENST00000558439 IL25Q9H293 177 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 SLC52A2Q9HAB3 445 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 ORC3Q9UBD5 711 aaPredicted RBP18.11■□□□□ 0.49
AP4E1-202ENST00000558439 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
AP4E1-202ENST00000558439 SERPINC1P01008 464 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 DDIT3P35638 169 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 FAM177A1Q8N128 213 aaPredicted RBP18.1■□□□□ 0.49
AP4E1-202ENST00000558439 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 RGS12O14924 1447 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
AP4E1-202ENST00000558439 AIDAQ96BJ3 306 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 PTGS1P23219 599 aa18.1■□□□□ 0.49
AP4E1-202ENST00000558439 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
AP4E1-202ENST00000558439 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 STARD3NLO95772 234 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 POLA2Q14181 598 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 KLF18A0A0U1RQI7 1052 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 TSC1Q92574 1164 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 ABCF2Q9UG63 623 aa18.09■□□□□ 0.49
AP4E1-202ENST00000558439 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.49
AP4E1-202ENST00000558439 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
AP4E1-202ENST00000558439 LIG1P18858 919 aa18.08■□□□□ 0.49
AP4E1-202ENST00000558439 MICU3Q86XE3 530 aa18.08■□□□□ 0.49
AP4E1-202ENST00000558439 TDO2P48775 406 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 ARHGEF25Q86VW2 580 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 PTPDC1A2A3K4 754 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 SASH1O94885 1247 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 TNNT1P13805 278 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 CBX1P83916 185 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 SART3Q15020 963 aaKnown RBP18.08■□□□□ 0.48
AP4E1-202ENST00000558439 OTUD7BQ6GQQ9 843 aa18.08■□□□□ 0.48
AP4E1-202ENST00000558439 MAP2P11137 1827 aaKnown RBP18.08■□□□□ 0.48
AP4E1-202ENST00000558439 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
AP4E1-202ENST00000558439 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
AP4E1-202ENST00000558439 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
AP4E1-202ENST00000558439 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
AP4E1-202ENST00000558439 DHX32Q7L7V1 743 aaKnown RBP18.07■□□□□ 0.48
AP4E1-202ENST00000558439 PIBF1Q8WXW3 757 aa18.07■□□□□ 0.48
AP4E1-202ENST00000558439 FAM89AQ96GI7 184 aa18.07■□□□□ 0.48
AP4E1-202ENST00000558439 ZSCAN16Q9H4T2 348 aaPredicted RBP18.07■□□□□ 0.48
AP4E1-202ENST00000558439 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms