RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 NCOA1Q15788 1441 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 AMPD3Q01432 767 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 CROCCP2Q86T23 111 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 RLBP1P12271 317 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 NOP2P46087 812 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 BRD3Q15059 726 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 ELP1O95163 1332 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 CHMP4BP1P59074 171 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 ZBTB16Q05516 673 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
CSPG4P12-201ENST00000558282 TNNC1P63316 161 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 TRIM27P14373 513 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 HOMEZQ8IX15 550 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 LMBR1Q8WVP7 490 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 VCX3BQ9H321 246 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 LUC7L3O95232 432 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 BMP15O95972 392 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
CSPG4P12-201ENST00000558282 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 MAP7Q14244 749 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 ATL3Q6DD88 541 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 ATP5DP30049 168 aa13.39□□□□□ -0.27
CSPG4P12-201ENST00000558282 FERP16591 822 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 PPP1R14CQ8TAE6 165 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 TSGA10Q9BZW7 698 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 IQCGQ9H095 443 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 EFCAB13Q8IY85 973 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 BAG1Q99933 345 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 CIB2O75838 187 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 CETN1Q12798 172 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 CEP120Q8N960 986 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
CSPG4P12-201ENST00000558282 RAD50Q92878 1312 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 SEPT14Q6ZU15 432 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 NAPGQ99747 312 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 CARD6Q9BX69 1037 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 WWC2Q6AWC2 1192 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 ARHGAP45Q92619 1136 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 PTPRCP08575 1304 aa13.37□□□□□ -0.27
CSPG4P12-201ENST00000558282 GOLGA6BA6NDN3 693 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 PHLDB2Q86SQ0 1253 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 NEDD9Q14511 834 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 ZNF75DP51815 510 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 JRKLQ9Y4A0 524 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 MYO1BO43795 1136 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms