RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
CHRNB4-203ENST00000558216 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
CHRNB4-203ENST00000558216 RBM17Q96I25 401 aaKnown RBP17.04■□□□□ 0.32
CHRNB4-203ENST00000558216 NEXNQ0ZGT2 675 aa17.03■□□□□ 0.32
CHRNB4-203ENST00000558216 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
CHRNB4-203ENST00000558216 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
CHRNB4-203ENST00000558216 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 MYD88Q99836 296 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.32
CHRNB4-203ENST00000558216 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 SLFN5Q08AF3 891 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 FLIIQ13045 1269 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
CHRNB4-203ENST00000558216 LTBP1Q14766 1721 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 OLFM4Q6UX06 510 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
CHRNB4-203ENST00000558216 ZNF428Q96B54 188 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
CHRNB4-203ENST00000558216 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
CHRNB4-203ENST00000558216 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
CHRNB4-203ENST00000558216 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
CHRNB4-203ENST00000558216 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
CHRNB4-203ENST00000558216 ZNF277Q9NRM2 450 aaPredicted RBP16.99■□□□□ 0.31
CHRNB4-203ENST00000558216 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
CHRNB4-203ENST00000558216 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 EPHX2P34913 555 aa16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 G2E3Q7L622 706 aa16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 FAM89AQ96GI7 184 aa16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
CHRNB4-203ENST00000558216 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 BBOX1O75936 387 aa16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 CT47B1P0C2W7 299 aaPredicted RBP16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 DEFB115Q30KQ5 88 aa16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 COL4A5P29400 1685 aa16.97■□□□□ 0.31
CHRNB4-203ENST00000558216 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 CNTROBQ8N137 903 aa16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
CHRNB4-203ENST00000558216 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
CHRNB4-203ENST00000558216 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 GRAPQ13588 217 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 PSMD1Q99460 953 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 ABCC4O15439 1325 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
CHRNB4-203ENST00000558216 FZD9O00144 591 aa16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 PDE8AO60658 829 aa16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 MAP2K1Q02750 393 aaPredicted RBP16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 PNMA8AQ86V59 439 aaPredicted RBP16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
CHRNB4-203ENST00000558216 CASP8AP2Q9UKL3 1982 aa16.92■□□□□ 0.3
CHRNB4-203ENST00000558216 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
CHRNB4-203ENST00000558216 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
CHRNB4-203ENST00000558216 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
CHRNB4-203ENST00000558216 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
CHRNB4-203ENST00000558216 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHRNB4-203ENST00000558216 GCKRQ14397 625 aa16.91■□□□□ 0.3
CHRNB4-203ENST00000558216 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
CHRNB4-203ENST00000558216 GPC2Q8N158 579 aa16.91■□□□□ 0.3
CHRNB4-203ENST00000558216 PTPRCP08575 1304 aa16.91■□□□□ 0.3
CHRNB4-203ENST00000558216 PDE4DIPQ5VU43 2346 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 CACNA1FO60840 1977 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 CAPNS2Q96L46 248 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
CHRNB4-203ENST00000558216 H7C1W4 665 aa16.89■□□□□ 0.29
CHRNB4-203ENST00000558216 MLLT1Q03111 559 aaPredicted RBP16.89■□□□□ 0.29
CHRNB4-203ENST00000558216 SSH1Q8WYL5 1049 aa16.89■□□□□ 0.29
CHRNB4-203ENST00000558216 F6X3S4 739 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms