RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 GPTP24298 496 aa23.52■■□□□ 1.36
LHX4-202ENST00000558139 SULF1Q8IWU6 871 aa23.52■■□□□ 1.36
LHX4-202ENST00000558139 SP8Q8IXZ3 490 aa23.52■■□□□ 1.36
LHX4-202ENST00000558139 YDJCA8MPS7 323 aa23.51■■□□□ 1.35
LHX4-202ENST00000558139 U2SURPO15042 1029 aaKnown RBP23.51■■□□□ 1.35
LHX4-202ENST00000558139 RBM26Q5T8P6 1007 aaKnown RBP23.51■■□□□ 1.35
LHX4-202ENST00000558139 C3orf67Q6ZVT6 689 aa23.51■■□□□ 1.35
LHX4-202ENST00000558139 RASAL3Q86YV0 1011 aa23.51■■□□□ 1.35
LHX4-202ENST00000558139 MAP3K15Q6ZN16 1313 aa23.51■■□□□ 1.35
LHX4-202ENST00000558139 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
LHX4-202ENST00000558139 NOM1Q5C9Z4 860 aaKnown RBP23.5■■□□□ 1.35
LHX4-202ENST00000558139 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
LHX4-202ENST00000558139 GPR25O00155 361 aa23.49■■□□□ 1.35
LHX4-202ENST00000558139 UBN2Q6ZU65 1347 aa23.49■■□□□ 1.35
LHX4-202ENST00000558139 EGFRP00533 1210 aa23.48■■□□□ 1.35
LHX4-202ENST00000558139 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
LHX4-202ENST00000558139 PPP1R42Q7Z4L9 355 aa23.48■■□□□ 1.35
LHX4-202ENST00000558139 ABCC4O15439 1325 aa23.48■■□□□ 1.35
LHX4-202ENST00000558139 PSMD14O00487 310 aa23.47■■□□□ 1.35
LHX4-202ENST00000558139 NTSR2O95665 410 aa23.47■■□□□ 1.35
LHX4-202ENST00000558139 RPS12P25398 132 aaKnown RBP23.47■■□□□ 1.35
LHX4-202ENST00000558139 FKBP1BP68106 108 aa23.47■■□□□ 1.35
LHX4-202ENST00000558139 INTS3Q68E01 1043 aaKnown RBP23.47■■□□□ 1.35
LHX4-202ENST00000558139 CDCA5Q96FF9 252 aa23.47■■□□□ 1.35
LHX4-202ENST00000558139 MKI67P46013 3256 aaKnown RBP23.46■■□□□ 1.35
LHX4-202ENST00000558139 DLL1O00548 723 aa23.46■■□□□ 1.35
LHX4-202ENST00000558139 ZNF34Q8IZ26 560 aa23.46■■□□□ 1.35
LHX4-202ENST00000558139 RTF1Q92541 710 aaKnown RBP23.46■■□□□ 1.35
LHX4-202ENST00000558139 FKTNO75072 461 aa23.44■■□□□ 1.34
LHX4-202ENST00000558139 SLC10A5Q5PT55 438 aa23.44■■□□□ 1.34
LHX4-202ENST00000558139 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
LHX4-202ENST00000558139 ZBTB3Q9H5J0 574 aa23.44■■□□□ 1.34
LHX4-202ENST00000558139 GGA3Q9NZ52 723 aa23.44■■□□□ 1.34
LHX4-202ENST00000558139 KIF4BQ2VIQ3 1234 aa23.43■■□□□ 1.34
LHX4-202ENST00000558139 PARP10Q53GL7 1025 aa23.43■■□□□ 1.34
LHX4-202ENST00000558139 PHACTR3Q96KR7 559 aa23.43■■□□□ 1.34
LHX4-202ENST00000558139 TM4SF4P48230 202 aa23.42■■□□□ 1.34
LHX4-202ENST00000558139 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
LHX4-202ENST00000558139 POTEFA5A3E0 1075 aa23.41■■□□□ 1.34
LHX4-202ENST00000558139 WASHC4Q2M389 1173 aa23.41■■□□□ 1.34
LHX4-202ENST00000558139 MCM10Q7L590 875 aa23.41■■□□□ 1.34
LHX4-202ENST00000558139 UTP14AQ9BVJ6 771 aaKnown RBP23.41■■□□□ 1.34
LHX4-202ENST00000558139 COLQQ9Y215 455 aaPredicted RBP23.41■■□□□ 1.34
LHX4-202ENST00000558139 EIF4G2P78344 907 aaKnown RBP eCLIP23.4■■□□□ 1.34
LHX4-202ENST00000558139 GIGYF2Q6Y7W6 1299 aaKnown RBP23.4■■□□□ 1.34
LHX4-202ENST00000558139 DDX46Q7L014 1031 aaKnown RBP23.4■■□□□ 1.34
LHX4-202ENST00000558139 DBNDD1Q9H9R9 158 aa23.4■■□□□ 1.34
LHX4-202ENST00000558139 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
LHX4-202ENST00000558139 GRAPQ13588 217 aa23.38■■□□□ 1.33
LHX4-202ENST00000558139 TMC4Q7Z404 712 aa23.38■■□□□ 1.33
LHX4-202ENST00000558139 GRAPLQ8TC17 118 aaPredicted RBP23.38■■□□□ 1.33
LHX4-202ENST00000558139 MYL6BP14649 208 aa23.37■■□□□ 1.33
LHX4-202ENST00000558139 CFHR5Q9BXR6 569 aa23.37■■□□□ 1.33
LHX4-202ENST00000558139 ASTN2O75129 1339 aaPredicted RBP23.36■■□□□ 1.33
LHX4-202ENST00000558139 SREBF2Q12772 1141 aa23.36■■□□□ 1.33
LHX4-202ENST00000558139 TAF7Q15545 349 aaPredicted RBP23.36■■□□□ 1.33
LHX4-202ENST00000558139 ANGEL2Q5VTE6 544 aaKnown RBP23.36■■□□□ 1.33
LHX4-202ENST00000558139 SLC17A8Q8NDX2 589 aa23.36■■□□□ 1.33
LHX4-202ENST00000558139 TIMELESSQ9UNS1 1208 aa23.36■■□□□ 1.33
LHX4-202ENST00000558139 POLR2AP24928 1970 aaKnown RBP23.35■■□□□ 1.33
LHX4-202ENST00000558139 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
LHX4-202ENST00000558139 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
LHX4-202ENST00000558139 TRIM17Q9Y577 477 aa23.35■■□□□ 1.33
LHX4-202ENST00000558139 UBE2Q2LH0YL09 131 aa23.34■■□□□ 1.33
LHX4-202ENST00000558139 SCARF1Q14162 830 aa23.34■■□□□ 1.33
LHX4-202ENST00000558139 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
LHX4-202ENST00000558139 ECE2O60344 883 aa23.33■■□□□ 1.33
LHX4-202ENST00000558139 DCTN1Q14203 1278 aa23.33■■□□□ 1.33
LHX4-202ENST00000558139 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
LHX4-202ENST00000558139 MOB2Q70IA6 237 aa23.33■■□□□ 1.33
LHX4-202ENST00000558139 KCNQ5Q9NR82 932 aa23.33■■□□□ 1.33
LHX4-202ENST00000558139 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
LHX4-202ENST00000558139 NUP98P52948 1817 aa23.33■■□□□ 1.32
LHX4-202ENST00000558139 RTL9Q8NET4 1388 aa23.32■■□□□ 1.32
LHX4-202ENST00000558139 C6orf229H3BNL8 230 aa23.32■■□□□ 1.32
LHX4-202ENST00000558139 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
LHX4-202ENST00000558139 EN2P19622 333 aaPredicted RBP23.32■■□□□ 1.32
LHX4-202ENST00000558139 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
LHX4-202ENST00000558139 ALDH1A1P00352 501 aa23.31■■□□□ 1.32
LHX4-202ENST00000558139 VIL1P09327 827 aaKnown RBP23.31■■□□□ 1.32
LHX4-202ENST00000558139 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
LHX4-202ENST00000558139 MKRN3Q13064 507 aaKnown RBP23.31■■□□□ 1.32
LHX4-202ENST00000558139 TTLL12Q14166 644 aaPredicted RBP23.31■■□□□ 1.32
LHX4-202ENST00000558139 DOK7Q18PE1 504 aa23.31■■□□□ 1.32
LHX4-202ENST00000558139 EYA3Q99504 573 aa23.31■■□□□ 1.32
LHX4-202ENST00000558139 R3HDMLQ9H3Y0 253 aa23.31■■□□□ 1.32
LHX4-202ENST00000558139 OTOP1Q7RTM1 612 aa23.3■■□□□ 1.32
LHX4-202ENST00000558139 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
LHX4-202ENST00000558139 PAPPA2Q9BXP8 1791 aa23.29■■□□□ 1.32
LHX4-202ENST00000558139 PNISRQ8TF01 805 aaKnown RBP23.29■■□□□ 1.32
LHX4-202ENST00000558139 ZNF280AP59817 542 aaPredicted RBP23.28■■□□□ 1.32
LHX4-202ENST00000558139 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
LHX4-202ENST00000558139 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
LHX4-202ENST00000558139 PITPNM2Q9BZ72 1349 aa23.28■■□□□ 1.32
LHX4-202ENST00000558139 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
LHX4-202ENST00000558139 TMEM106CQ9BVX2 250 aa23.27■■□□□ 1.32
LHX4-202ENST00000558139 AGBL3Q8NEM8 1001 aa23.26■■□□□ 1.31
LHX4-202ENST00000558139 ARMC5Q96C12 935 aa23.26■■□□□ 1.31
LHX4-202ENST00000558139 PTPN22Q9Y2R2 807 aa23.26■■□□□ 1.31
LHX4-202ENST00000558139 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms