RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
CSHL1-207ENST00000558099 VEGFAP15692 232 aaPredicted RBP16.9■□□□□ 0.3
CSHL1-207ENST00000558099 FSTL1Q12841 308 aa16.9■□□□□ 0.3
CSHL1-207ENST00000558099 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
CSHL1-207ENST00000558099 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
CSHL1-207ENST00000558099 COL4A5P29400 1685 aa16.9■□□□□ 0.3
CSHL1-207ENST00000558099 TSPYL6Q8N831 410 aa16.89■□□□□ 0.3
CSHL1-207ENST00000558099 FZD9O00144 591 aa16.89■□□□□ 0.29
CSHL1-207ENST00000558099 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
CSHL1-207ENST00000558099 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
CSHL1-207ENST00000558099 PHAXQ9H814 394 aaKnown RBP16.89■□□□□ 0.29
CSHL1-207ENST00000558099 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
CSHL1-207ENST00000558099 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
CSHL1-207ENST00000558099 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
CSHL1-207ENST00000558099 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
CSHL1-207ENST00000558099 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
CSHL1-207ENST00000558099 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
CSHL1-207ENST00000558099 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
CSHL1-207ENST00000558099 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
CSHL1-207ENST00000558099 LAMB2P55268 1798 aa16.87■□□□□ 0.29
CSHL1-207ENST00000558099 ABCC4O15439 1325 aa16.86■□□□□ 0.29
CSHL1-207ENST00000558099 ELL2O00472 640 aaPredicted RBP16.86■□□□□ 0.29
CSHL1-207ENST00000558099 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
CSHL1-207ENST00000558099 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
CSHL1-207ENST00000558099 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
CSHL1-207ENST00000558099 RPGRQ92834 1020 aaKnown RBP16.86■□□□□ 0.29
CSHL1-207ENST00000558099 ATP6V0A2Q9Y487 856 aa16.86■□□□□ 0.29
CSHL1-207ENST00000558099 APLP1P51693 650 aa16.85■□□□□ 0.29
CSHL1-207ENST00000558099 SF3B3Q15393 1217 aaKnown RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 DDX60Q8IY21 1712 aaKnown RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
CSHL1-207ENST00000558099 PPEF1O14829 653 aaPredicted RBP16.85■□□□□ 0.29
CSHL1-207ENST00000558099 COL4A1P02462 1669 aa16.84■□□□□ 0.29
CSHL1-207ENST00000558099 ATP5J2-PTCD1G3V325 749 aa16.84■□□□□ 0.29
CSHL1-207ENST00000558099 BBOX1O75936 387 aa16.84■□□□□ 0.29
CSHL1-207ENST00000558099 PDE3AQ14432 1141 aa16.84■□□□□ 0.29
CSHL1-207ENST00000558099 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
CSHL1-207ENST00000558099 C20orf194Q5TEA3 1177 aa16.83■□□□□ 0.28
CSHL1-207ENST00000558099 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
CSHL1-207ENST00000558099 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
CSHL1-207ENST00000558099 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
CSHL1-207ENST00000558099 CCDC30Q5VVM6 783 aa16.82■□□□□ 0.28
CSHL1-207ENST00000558099 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
CSHL1-207ENST00000558099 VPS33BQ9H267 617 aa16.82■□□□□ 0.28
CSHL1-207ENST00000558099 POTEIP0CG38 1075 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 GRAPQ13588 217 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 GLIPR1L2Q4G1C9 344 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 GRAPLQ8TC17 118 aaPredicted RBP16.81■□□□□ 0.28
CSHL1-207ENST00000558099 DUOX1Q9NRD9 1551 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
CSHL1-207ENST00000558099 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
CSHL1-207ENST00000558099 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
CSHL1-207ENST00000558099 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
CSHL1-207ENST00000558099 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
CSHL1-207ENST00000558099 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
CSHL1-207ENST00000558099 RIC3Q7Z5B4 369 aa16.8■□□□□ 0.28
CSHL1-207ENST00000558099 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
CSHL1-207ENST00000558099 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
CSHL1-207ENST00000558099 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
CSHL1-207ENST00000558099 SCN4AP35499 1836 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 VAMP4O75379 141 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
CSHL1-207ENST00000558099 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
CSHL1-207ENST00000558099 G2E3Q7L622 706 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 GPC2Q8N158 579 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
CSHL1-207ENST00000558099 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
CSHL1-207ENST00000558099 HTRA3P83110 453 aa16.78■□□□□ 0.28
CSHL1-207ENST00000558099 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
CSHL1-207ENST00000558099 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
CSHL1-207ENST00000558099 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
CSHL1-207ENST00000558099 TAF1P21675 1872 aa16.78■□□□□ 0.28
CSHL1-207ENST00000558099 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
CSHL1-207ENST00000558099 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
CSHL1-207ENST00000558099 TMC4Q7Z404 712 aa16.77■□□□□ 0.28
CSHL1-207ENST00000558099 MYD88Q99836 296 aa16.77■□□□□ 0.28
CSHL1-207ENST00000558099 LTBP1Q14766 1721 aa16.77■□□□□ 0.28
CSHL1-207ENST00000558099 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.27
CSHL1-207ENST00000558099 IQCA1LA6NCM1 817 aa16.77■□□□□ 0.27
CSHL1-207ENST00000558099 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.27
CSHL1-207ENST00000558099 JMYQ8N9B5 988 aa16.77■□□□□ 0.27
CSHL1-207ENST00000558099 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.27
CSHL1-207ENST00000558099 PASKQ96RG2 1323 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 BCAR3O75815 825 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
CSHL1-207ENST00000558099 SCNN1DP51172 638 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 KIAA2012Q0VF49 1180 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
CSHL1-207ENST00000558099 AOC3Q16853 763 aa16.75■□□□□ 0.27
CSHL1-207ENST00000558099 LARGE2Q8N3Y3 721 aa16.75■□□□□ 0.27
CSHL1-207ENST00000558099 MPNDQ8N594 471 aa16.75■□□□□ 0.27
CSHL1-207ENST00000558099 JDP2Q8WYK2 163 aa16.75■□□□□ 0.27
CSHL1-207ENST00000558099 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms