RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 RARAP10276 462 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 INPP5BP32019 993 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 ARTNQ5T4W7 220 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 MSL1Q68DK7 614 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 SHISA2Q6UWI4 295 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 DHX32Q7L7V1 743 aaKnown RBP6.1□□□□□ -1.43
VPS13C-205ENST00000558088 FNBP4Q8N3X1 1017 aaPredicted RBP6.1□□□□□ -1.43
VPS13C-205ENST00000558088 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
VPS13C-205ENST00000558088 BCS1LQ9Y276 419 aa6.1□□□□□ -1.43
VPS13C-205ENST00000558088 MICAL2O94851 1124 aa6.09□□□□□ -1.43
VPS13C-205ENST00000558088 KANK4Q5T7N3 995 aaPredicted RBP6.09□□□□□ -1.43
VPS13C-205ENST00000558088 TRPM4Q8TD43 1214 aa6.09□□□□□ -1.43
VPS13C-205ENST00000558088 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
VPS13C-205ENST00000558088 EIF2AK2P19525 551 aaKnown RBP6.08□□□□□ -1.44
VPS13C-205ENST00000558088 GPLD1P80108 840 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 C11orf91Q3C1V1 193 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 FBXO11Q86XK2 927 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 FAM200AQ8TCP9 573 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 PSMG3-AS1Q96PY0 264 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 RBSNQ9H1K0 784 aa6.08□□□□□ -1.44
VPS13C-205ENST00000558088 A6NJR5 290 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 SASH3O75995 380 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 TARSP26639 723 aaKnown RBP6.07□□□□□ -1.44
VPS13C-205ENST00000558088 NRLP54845 237 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 MLLT1Q03111 559 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-205ENST00000558088 LRP8Q14114 963 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 FOXD4L6Q3SYB3 417 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-205ENST00000558088 PERM1Q5SV97 790 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 FOXD4L3Q6VB84 417 aaPredicted RBP6.07□□□□□ -1.44
VPS13C-205ENST00000558088 DCAF11Q8TEB1 546 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 TTC9Q92623 222 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 MYO19Q96H55 970 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 LPIN3Q9BQK8 851 aa6.07□□□□□ -1.44
VPS13C-205ENST00000558088 QTRT2Q9H974 415 aaKnown RBP6.07□□□□□ -1.44
VPS13C-205ENST00000558088 PSAPP07602 524 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 RFX1P22670 979 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 WEE1P30291 646 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 TMEM132AQ24JP5 1023 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 IGF2-ASQ6U949 168 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 WFDC12Q8WWY7 111 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 IFT43Q96FT9 208 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 SMG9Q9H0W8 520 aaKnown RBP6.06□□□□□ -1.44
VPS13C-205ENST00000558088 ZFATQ9P243 1243 aa6.06□□□□□ -1.44
VPS13C-205ENST00000558088 RTCBQ9Y3I0 505 aaKnown RBP6.06□□□□□ -1.44
VPS13C-205ENST00000558088 XYLBO75191 536 aa6.05□□□□□ -1.44
VPS13C-205ENST00000558088 GHRHP01286 108 aa6.05□□□□□ -1.44
VPS13C-205ENST00000558088 IREB2P48200 963 aaKnown RBP6.05□□□□□ -1.44
VPS13C-205ENST00000558088 PLAURQ03405 335 aa6.05□□□□□ -1.44
VPS13C-205ENST00000558088 RGL4Q8IZJ4 473 aa6.05□□□□□ -1.44
VPS13C-205ENST00000558088 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
VPS13C-205ENST00000558088 TLR7Q9NYK1 1049 aaKnown RBP6.05□□□□□ -1.44
VPS13C-205ENST00000558088 ZBTB42B2RXF5 422 aa6.04□□□□□ -1.44
VPS13C-205ENST00000558088 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
VPS13C-205ENST00000558088 HFE2Q6ZVN8 426 aa6.04□□□□□ -1.44
VPS13C-205ENST00000558088 CMTR1Q8N1G2 835 aaKnown RBP6.04□□□□□ -1.44
VPS13C-205ENST00000558088 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 EGFRP00533 1210 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 GRIK5Q16478 980 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 TREML1Q86YW5 311 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 PLD4Q96BZ4 506 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 ARXQ96QS3 562 aa6.03□□□□□ -1.44
VPS13C-205ENST00000558088 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
VPS13C-205ENST00000558088 SRA1Q9HD15 236 aaKnown RBP6.03□□□□□ -1.44
VPS13C-205ENST00000558088 NOS3P29474 1203 aa6.02□□□□□ -1.45
VPS13C-205ENST00000558088 GDF6Q6KF10 455 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-205ENST00000558088 ILDR2Q71H61 639 aa6.02□□□□□ -1.45
VPS13C-205ENST00000558088 MAP4K3Q8IVH8 894 aa6.02□□□□□ -1.45
VPS13C-205ENST00000558088 MRPL18Q9H0U6 180 aaKnown RBP6.02□□□□□ -1.45
VPS13C-205ENST00000558088 AKTIPQ9H8T0 292 aa6.02□□□□□ -1.45
VPS13C-205ENST00000558088 FAM13BQ9NYF5 915 aa6.02□□□□□ -1.45
VPS13C-205ENST00000558088 LOC102724428A0A0B4J2F2 783 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 OPLAHO14841 1288 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 SOX18P35713 384 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 SIK1P57059 783 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 SWI5Q1ZZU3 235 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 CACTIN-AS1Q8N1I8 211 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 IL22RA1Q8N6P7 574 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 NSUN5Q96P11 429 aaKnown RBP6.01□□□□□ -1.45
VPS13C-205ENST00000558088 NOVA2Q9UNW9 492 aaKnown RBP6.01□□□□□ -1.45
VPS13C-205ENST00000558088 USP20Q9Y2K6 914 aa6.01□□□□□ -1.45
VPS13C-205ENST00000558088 DLL1O00548 723 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 HYAL3O43820 417 aaPredicted RBP6□□□□□ -1.45
VPS13C-205ENST00000558088 DEAF1O75398 565 aaPredicted RBP6□□□□□ -1.45
VPS13C-205ENST00000558088 BRD2P25440 801 aaKnown RBP6□□□□□ -1.45
VPS13C-205ENST00000558088 CFAP70Q5T0N1 1121 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 SLC51AQ86UW1 340 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 KRTAP1-3Q8IUG1 177 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 MUC3BQ9H195 1237 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 LRFN2Q9ULH4 789 aa6□□□□□ -1.45
VPS13C-205ENST00000558088 ACIN1Q9UKV3 1341 aaKnown RBP5.99□□□□□ -1.45
VPS13C-205ENST00000558088 J3QW42 95 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 MMP20O60882 483 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 FKBP5Q13451 457 aaPredicted RBP5.99□□□□□ -1.45
VPS13C-205ENST00000558088 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 COX20Q5RI15 118 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 C16orf46Q6P387 395 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 PRR23CQ6ZRP0 262 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 NLRP13Q86W25 1043 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 PIK3R5Q8WYR1 880 aa5.99□□□□□ -1.45
VPS13C-205ENST00000558088 MEGF10Q96KG7 1140 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms