RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-206ENST00000558059 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
SNRPA1-206ENST00000558059 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 TOMM70O94826 608 aa11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 CC2D2BQ6DHV5 1058 aa11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 RIC3Q7Z5B4 369 aa11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 FANCIQ9NVI1 1328 aa11.32□□□□□ -0.6
SNRPA1-206ENST00000558059 POTECB2RU33 542 aa11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 G2E3Q7L622 706 aa11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 PSMD1Q99460 953 aa11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 ABCC4O15439 1325 aa11.31□□□□□ -0.6
SNRPA1-206ENST00000558059 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 VAMP4O75379 141 aa11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 VEGFAP15692 232 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 MYD88Q99836 296 aa11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
SNRPA1-206ENST00000558059 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 BBOX1O75936 387 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 HSPA6P17066 643 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 IARSP41252 1262 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 EXOSC9Q06265 439 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 KSR2Q6VAB6 950 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 DDX46Q7L014 1031 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 MAP3K2Q9Y2U5 619 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
SNRPA1-206ENST00000558059 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-206ENST00000558059 GRAPQ13588 217 aa11.28□□□□□ -0.6
SNRPA1-206ENST00000558059 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
SNRPA1-206ENST00000558059 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-206ENST00000558059 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-206ENST00000558059 COL4A5P29400 1685 aa11.27□□□□□ -0.6
SNRPA1-206ENST00000558059 FZD9O00144 591 aa11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 IGKV5-2P06315 115 aa11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 CWC25Q9NXE8 425 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 COL4A1P02462 1669 aa11.27□□□□□ -0.61
SNRPA1-206ENST00000558059 SCN4AP35499 1836 aa11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 FSTL1Q12841 308 aa11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 FLIIQ13045 1269 aa11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
SNRPA1-206ENST00000558059 MYH3P11055 1940 aa11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 LARGE2Q8N3Y3 721 aa11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 TMX4Q9H1E5 349 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
SNRPA1-206ENST00000558059 NEURL1BA8MQ27 555 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 CCER2I3L3R5 266 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 PDE8AO60658 829 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 NEXNQ0ZGT2 675 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 MPNDQ8N594 471 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 SMC1BQ8NDV3 1235 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
SNRPA1-206ENST00000558059 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 H7C1W4 665 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 PPIP5K2O43314 1243 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 APLP1P51693 650 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 FKBP5Q13451 457 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 AOC3Q16853 763 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 DNAAF4Q8WXU2 420 aa11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-206ENST00000558059 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 GCKRQ14397 625 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 GPC2Q8N158 579 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms