RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PI4K2BQ8TCG2 481 aa25.05■■□□□ 1.6
SNRPA1-205ENST00000558036 CDC45O75419 566 aa25.04■■□□□ 1.6
SNRPA1-205ENST00000558036 MAP4K4O95819 1239 aaPredicted RBP25.04■■□□□ 1.6
SNRPA1-205ENST00000558036 IFIT5Q13325 482 aaKnown RBP25.04■■□□□ 1.6
SNRPA1-205ENST00000558036 TRAPPC3LQ5T215 181 aa25.04■■□□□ 1.6
SNRPA1-205ENST00000558036 RFC4P35249 363 aa25.03■■□□□ 1.6
SNRPA1-205ENST00000558036 ANP32AP39687 249 aaKnown RBP25.03■■□□□ 1.6
SNRPA1-205ENST00000558036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.03■■□□□ 1.6
SNRPA1-205ENST00000558036 ITGA6P23229 1130 aa25.03■■□□□ 1.6
SNRPA1-205ENST00000558036 SCN7AQ01118 1682 aa25.02■■□□□ 1.6
SNRPA1-205ENST00000558036 TRIM6-TRIM34B2RNG4 842 aa25.02■■□□□ 1.6
SNRPA1-205ENST00000558036 EYA2O00167 538 aa25.02■■□□□ 1.6
SNRPA1-205ENST00000558036 TAF7LQ5H9L4 462 aa25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 RILPL2Q969X0 211 aa25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 AOX1Q06278 1338 aa25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 TNNI3KQ59H18 835 aa25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 FPGT-TNNI3KV9GXZ4 949 aa25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 USP42Q9H9J4 1324 aaKnown RBP25.01■■□□□ 1.59
SNRPA1-205ENST00000558036 IL15P40933 162 aaPredicted RBP25■■□□□ 1.59
SNRPA1-205ENST00000558036 ERFEQ4G0M1 354 aa25■■□□□ 1.59
SNRPA1-205ENST00000558036 ECHDC1Q9NTX5 307 aa25■■□□□ 1.59
SNRPA1-205ENST00000558036 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
SNRPA1-205ENST00000558036 SETDB2Q96T68 719 aa24.98■■□□□ 1.59
SNRPA1-205ENST00000558036 TTC41PQ6P2S7 1318 aa24.98■■□□□ 1.59
SNRPA1-205ENST00000558036 ANKRD18BA2A2Z9 1011 aa24.98■■□□□ 1.59
SNRPA1-205ENST00000558036 DBNLQ9UJU6 430 aaKnown RBP24.98■■□□□ 1.59
SNRPA1-205ENST00000558036 C4AP0C0L4 1744 aa24.97■■□□□ 1.59
SNRPA1-205ENST00000558036 PLSCR1O15162 318 aa24.97■■□□□ 1.59
SNRPA1-205ENST00000558036 CIAO1O76071 339 aa24.97■■□□□ 1.59
SNRPA1-205ENST00000558036 GPATCH3Q96I76 525 aa24.97■■□□□ 1.59
SNRPA1-205ENST00000558036 CCDC24Q8N4L8 307 aa24.97■■□□□ 1.59
SNRPA1-205ENST00000558036 RGL2O15211 777 aa24.96■■□□□ 1.59
SNRPA1-205ENST00000558036 SEC31BQ9NQW1 1179 aa24.96■■□□□ 1.59
SNRPA1-205ENST00000558036 GLRX3O76003 335 aaKnown RBP24.95■■□□□ 1.59
SNRPA1-205ENST00000558036 GTF2E1P29083 439 aaPredicted RBP24.95■■□□□ 1.59
SNRPA1-205ENST00000558036 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.59
SNRPA1-205ENST00000558036 C3orf67Q6ZVT6 689 aa24.95■■□□□ 1.59
SNRPA1-205ENST00000558036 DBNDD2Q9BQY9 259 aa24.95■■□□□ 1.59
SNRPA1-205ENST00000558036 TIMM10P62072 90 aa24.95■■□□□ 1.58
SNRPA1-205ENST00000558036 NBPF5PQ86XG9 351 aaPredicted RBP24.95■■□□□ 1.58
SNRPA1-205ENST00000558036 TBC1D32Q96NH3 1257 aa24.95■■□□□ 1.58
SNRPA1-205ENST00000558036 ERC2O15083 957 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 ADRA2BP18089 450 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 ZNF827Q17R98 1081 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 NEUROD6Q96NK8 337 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 DDX60Q8IY21 1712 aaKnown RBP24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 MYH3P11055 1940 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 TUBGCP6Q96RT7 1819 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 ABCC12Q96J65 1359 aa24.94■■□□□ 1.58
SNRPA1-205ENST00000558036 UBR3Q6ZT12 1888 aa24.93■■□□□ 1.58
SNRPA1-205ENST00000558036 CNNM1Q9NRU3 951 aa24.93■■□□□ 1.58
SNRPA1-205ENST00000558036 CEP126Q9P2H0 1117 aa24.93■■□□□ 1.58
SNRPA1-205ENST00000558036 SSFA2P28290 1259 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 C22orf23Q9BZE7 217 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 BOLA2Q9H3K6 86 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 RIPOR2Q9Y4F9 1068 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 NFIXQ14938 502 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 CCDC152Q4G0S7 254 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 CASC1Q6TDU7 716 aa24.92■■□□□ 1.58
SNRPA1-205ENST00000558036 TFCP2L1Q9NZI6 479 aa24.91■■□□□ 1.58
SNRPA1-205ENST00000558036 FBXO3Q9UK99 471 aa24.91■■□□□ 1.58
SNRPA1-205ENST00000558036 GYS1P13807 737 aa24.91■■□□□ 1.58
SNRPA1-205ENST00000558036 RIC1Q4ADV7 1423 aa24.9■■□□□ 1.58
SNRPA1-205ENST00000558036 A0A1B0GUL7 405 aa24.9■■□□□ 1.58
SNRPA1-205ENST00000558036 HSP90B1P14625 803 aaKnown RBP24.9■■□□□ 1.58
SNRPA1-205ENST00000558036 METTL24Q5JXM2 366 aa24.9■■□□□ 1.58
SNRPA1-205ENST00000558036 NYXQ9GZU5 481 aa24.9■■□□□ 1.58
SNRPA1-205ENST00000558036 CHMLP26374 656 aa24.89■■□□□ 1.58
SNRPA1-205ENST00000558036 CNTROBQ8N137 903 aa24.89■■□□□ 1.58
SNRPA1-205ENST00000558036 GPR108Q9NPR9 543 aa24.89■■□□□ 1.58
SNRPA1-205ENST00000558036 NDUFB9Q9Y6M9 179 aa24.89■■□□□ 1.58
SNRPA1-205ENST00000558036 ZNF609O15014 1411 aa24.89■■□□□ 1.58
SNRPA1-205ENST00000558036 TPTE2Q6XPS3 522 aa24.88■■□□□ 1.57
SNRPA1-205ENST00000558036 IPO9Q96P70 1041 aaKnown RBP24.88■■□□□ 1.57
SNRPA1-205ENST00000558036 TNS1Q9HBL0 1735 aaKnown RBP24.88■■□□□ 1.57
SNRPA1-205ENST00000558036 NPHP1O15259 732 aa24.88■■□□□ 1.57
SNRPA1-205ENST00000558036 COL24A1Q17RW2 1714 aa24.87■■□□□ 1.57
SNRPA1-205ENST00000558036 HELBQ8NG08 1087 aaPredicted RBP24.87■■□□□ 1.57
SNRPA1-205ENST00000558036 AKT1S1Q96B36 256 aa24.87■■□□□ 1.57
SNRPA1-205ENST00000558036 EDC3Q96F86 508 aaKnown RBP24.87■■□□□ 1.57
SNRPA1-205ENST00000558036 ADORA1P30542 326 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 SLC10A5Q5PT55 438 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 CARMIL3Q8ND23 1372 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 COL4A1P02462 1669 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 LAMB2P55268 1798 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
SNRPA1-205ENST00000558036 ATP5JP18859 108 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 RTL9Q8NET4 1388 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 MSH5O43196 834 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 EN1Q05925 392 aaPredicted RBP24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 SF3B3Q15393 1217 aaKnown RBP24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 VGLL2Q8N8G2 317 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 IL25Q9H293 177 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 AKAP2Q9Y2D5 859 aa24.85■■□□□ 1.57
SNRPA1-205ENST00000558036 ESYT1Q9BSJ8 1104 aa24.84■■□□□ 1.57
SNRPA1-205ENST00000558036 LRP5O75197 1615 aa24.84■■□□□ 1.57
SNRPA1-205ENST00000558036 EZH2Q15910 746 aaKnown RBP24.83■■□□□ 1.57
SNRPA1-205ENST00000558036 XAGE2Q96GT9 111 aa24.83■■□□□ 1.57
SNRPA1-205ENST00000558036 IGHMBP2P38935 993 aaKnown RBP24.83■■□□□ 1.57
SNRPA1-205ENST00000558036 ATP2B3Q16720 1220 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms