RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 RIC1Q4ADV7 1423 aa13.21□□□□□ -0.3
IGKV2D-28-202ENST00000558026 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 TM4SF4P48230 202 aa13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
IGKV2D-28-202ENST00000558026 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 KCNQ3O43525 872 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
IGKV2D-28-202ENST00000558026 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
IGKV2D-28-202ENST00000558026 PSMD14O00487 310 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 HMOX1P09601 288 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 IL13P35225 146 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 DPF2Q92785 391 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
IGKV2D-28-202ENST00000558026 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
IGKV2D-28-202ENST00000558026 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
IGKV2D-28-202ENST00000558026 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
IGKV2D-28-202ENST00000558026 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
IGKV2D-28-202ENST00000558026 CAP1Q01518 475 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 TEFQ10587 303 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 LAMA3Q16787 3333 aa13.14□□□□□ -0.31
IGKV2D-28-202ENST00000558026 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 FKBP1BP68106 108 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 ANGEL2Q5VTE6 544 aaKnown RBP13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 MPNDQ8N594 471 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 NUP98P52948 1817 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 ZNF609O15014 1411 aa13.13□□□□□ -0.31
IGKV2D-28-202ENST00000558026 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 GPTP24298 496 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SREBF2Q12772 1141 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 DPF3Q92784 378 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 DBNDD1Q9H9R9 158 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 ABCC4O15439 1325 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
IGKV2D-28-202ENST00000558026 TAF1P21675 1872 aa13.11□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SUSD4Q5VX71 490 aa13.11□□□□□ -0.31
IGKV2D-28-202ENST00000558026 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
IGKV2D-28-202ENST00000558026 RGL2O15211 777 aa13.1□□□□□ -0.31
IGKV2D-28-202ENST00000558026 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
IGKV2D-28-202ENST00000558026 Q7L0L9 218 aa13.1□□□□□ -0.31
IGKV2D-28-202ENST00000558026 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
IGKV2D-28-202ENST00000558026 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SCARF1Q14162 830 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
IGKV2D-28-202ENST00000558026 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
IGKV2D-28-202ENST00000558026 DEFB123Q8N688 67 aa13.08□□□□□ -0.32
IGKV2D-28-202ENST00000558026 LAMB2P55268 1798 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 NTSR2O95665 410 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 SLC9C1Q4G0N8 1177 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 IFNL1Q8IU54 200 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 PTCH2Q9Y6C5 1203 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 VCANP13611 3396 aa13.07□□□□□ -0.32
IGKV2D-28-202ENST00000558026 IGF2BP3O00425 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 ALDH1A1P00352 501 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 PRKG1Q13976 671 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
IGKV2D-28-202ENST00000558026 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms