RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 TFIP11Q9UBB9 837 aaKnown RBP15.84■□□□□ 0.13
SEMA6D-208ENST00000558014 LDHBP07195 334 aaKnown RBP15.84■□□□□ 0.13
SEMA6D-208ENST00000558014 ARHGAP27Q6ZUM4 889 aa15.84■□□□□ 0.13
SEMA6D-208ENST00000558014 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
SEMA6D-208ENST00000558014 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
SEMA6D-208ENST00000558014 ATP10BO94823 1461 aa15.83■□□□□ 0.13
SEMA6D-208ENST00000558014 ABCC11Q96J66 1382 aa15.83■□□□□ 0.13
SEMA6D-208ENST00000558014 TMX1Q9H3N1 280 aa15.83■□□□□ 0.12
SEMA6D-208ENST00000558014 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
SEMA6D-208ENST00000558014 HOXC9P31274 260 aa15.83■□□□□ 0.12
SEMA6D-208ENST00000558014 DCAF5Q96JK2 942 aa15.83■□□□□ 0.12
SEMA6D-208ENST00000558014 CBFA2T2O43439 604 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 TCHPQ9BT92 498 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 ZNF397Q8NF99 534 aaPredicted RBP15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 PRKCSHP14314 528 aaPredicted RBP15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 TAF4BQ92750 862 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 EPB41L2O43491 1005 aaKnown RBP15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 PRC1O43663 620 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 RHPN1Q8TCX5 695 aa15.82■□□□□ 0.12
SEMA6D-208ENST00000558014 TDRD12Q587J7 1177 aaKnown RBP15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 QTRT2Q9H974 415 aaKnown RBP15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 TNNI2P48788 182 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 FNBP4Q8N3X1 1017 aaPredicted RBP15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 PICK1Q9NRD5 415 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 NEK1Q96PY6 1258 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 NOD1Q9Y239 953 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 COMMD10Q9Y6G5 202 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 TCP10Q12799 353 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 NAPAP54920 295 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
SEMA6D-208ENST00000558014 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 UBA7P41226 1012 aa15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 RNMTO43148 476 aaKnown RBP15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 TBCAO75347 108 aaKnown RBP15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 POLKQ9UBT6 870 aa15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 GINS2Q9Y248 185 aa15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 EP400NLQ6ZTU2 488 aa15.8■□□□□ 0.12
SEMA6D-208ENST00000558014 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 ESR2Q92731 530 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 A1BGP04217 495 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 MTIF2P46199 727 aaKnown RBP15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 TFCP2Q12800 502 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 ZKSCAN3Q9BRR0 538 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 TAF5LO75529 589 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 CTNNA2P26232 953 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
SEMA6D-208ENST00000558014 BRF1Q92994 677 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 PHACTR2O75167 634 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 RXRAP19793 462 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 GJB2P29033 226 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 GOLGA6L10A6NI86 522 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 SMTNL1A8MU46 457 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 IL15P40933 162 aaPredicted RBP15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 MRE11P49959 708 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 NPATQ14207 1427 aa15.78■□□□□ 0.12
SEMA6D-208ENST00000558014 SYCE3A1L190 88 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 CCP110O43303 1012 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 MAP3K11Q16584 847 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 BACH1O14867 736 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 CETN2P41208 172 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 SPA17Q15506 151 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
SEMA6D-208ENST00000558014 MCM5P33992 734 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 ARHGAP29Q52LW3 1261 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 CCDC178Q5BJE1 867 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 TMOD4Q9NZQ9 345 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 GGA1Q9UJY5 639 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 FLT4P35916 1363 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 TRIM37O94972 964 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 TAF12Q16514 161 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 FSIP1Q8NA03 581 aa15.77■□□□□ 0.11
SEMA6D-208ENST00000558014 IP6K1Q92551 441 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 UIMC1Q96RL1 719 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 SPDYE3A6NKU9 549 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 SYNCQ9H7C4 482 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 GPCPD1Q9NPB8 672 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 PAG1Q9NWQ8 432 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms