RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
RCCD1-209ENST00000557750 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
RCCD1-209ENST00000557750 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
RCCD1-209ENST00000557750 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
RCCD1-209ENST00000557750 ALDH1L1O75891 902 aa15.46■□□□□ 0.07
RCCD1-209ENST00000557750 PDE6BP35913 854 aa15.46■□□□□ 0.07
RCCD1-209ENST00000557750 FTSJ3Q8IY81 847 aaKnown RBP15.46■□□□□ 0.07
RCCD1-209ENST00000557750 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
RCCD1-209ENST00000557750 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
RCCD1-209ENST00000557750 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.06
RCCD1-209ENST00000557750 IRS4O14654 1257 aaPredicted RBP15.45■□□□□ 0.06
RCCD1-209ENST00000557750 PCCAP05165 728 aaPredicted RBP15.45■□□□□ 0.06
RCCD1-209ENST00000557750 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
RCCD1-209ENST00000557750 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
RCCD1-209ENST00000557750 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
RCCD1-209ENST00000557750 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
RCCD1-209ENST00000557750 ABCC4O15439 1325 aa15.45■□□□□ 0.06
RCCD1-209ENST00000557750 UBE3BQ7Z3V4 1068 aa15.44■□□□□ 0.06
RCCD1-209ENST00000557750 PLIN1O60240 522 aa15.44■□□□□ 0.06
RCCD1-209ENST00000557750 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
RCCD1-209ENST00000557750 DZIP1LQ8IYY4 767 aaKnown RBP15.44■□□□□ 0.06
RCCD1-209ENST00000557750 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
RCCD1-209ENST00000557750 NLRP3Q96P20 1036 aa15.44■□□□□ 0.06
RCCD1-209ENST00000557750 H7C1W4 665 aa15.43■□□□□ 0.06
RCCD1-209ENST00000557750 GRM8O00222 908 aa15.43■□□□□ 0.06
RCCD1-209ENST00000557750 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
RCCD1-209ENST00000557750 COL11A2P13942 1736 aaPredicted RBP15.43■□□□□ 0.06
RCCD1-209ENST00000557750 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
RCCD1-209ENST00000557750 CDHR2Q9BYE9 1310 aa15.42■□□□□ 0.06
RCCD1-209ENST00000557750 LTBP3Q9NS15 1303 aa15.42■□□□□ 0.06
RCCD1-209ENST00000557750 FER1L6Q2WGJ9 1857 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
RCCD1-209ENST00000557750 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
RCCD1-209ENST00000557750 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 TMEM57Q8N5G2 664 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
RCCD1-209ENST00000557750 PDE8AO60658 829 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 SRGNP10124 158 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 MS4A1P11836 297 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
RCCD1-209ENST00000557750 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
RCCD1-209ENST00000557750 CNKSR1Q969H4 720 aa15.41■□□□□ 0.06
RCCD1-209ENST00000557750 NBPF7P0C2Y1 421 aaPredicted RBP15.4■□□□□ 0.06
RCCD1-209ENST00000557750 RLBP1P12271 317 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 CASP7P55210 303 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 PANK1Q8TE04 598 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 MASTLQ96GX5 879 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 MKRN1Q9UHC7 482 aaKnown RBP15.4■□□□□ 0.06
RCCD1-209ENST00000557750 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
RCCD1-209ENST00000557750 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
RCCD1-209ENST00000557750 NPR1P16066 1061 aa15.39■□□□□ 0.05
RCCD1-209ENST00000557750 USP44Q9H0E7 712 aa15.39■□□□□ 0.05
RCCD1-209ENST00000557750 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
RCCD1-209ENST00000557750 CCDC85AQ96PX6 553 aaPredicted RBP15.38■□□□□ 0.05
RCCD1-209ENST00000557750 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
RCCD1-209ENST00000557750 CTSWP56202 376 aa15.38■□□□□ 0.05
RCCD1-209ENST00000557750 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
RCCD1-209ENST00000557750 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
RCCD1-209ENST00000557750 UTYO14607 1347 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
RCCD1-209ENST00000557750 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 MEIS3Q99687 375 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
RCCD1-209ENST00000557750 ALDH1B1P30837 517 aa15.36■□□□□ 0.05
RCCD1-209ENST00000557750 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
RCCD1-209ENST00000557750 C20orf194Q5TEA3 1177 aa15.36■□□□□ 0.05
RCCD1-209ENST00000557750 GNAI3P08754 354 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
RCCD1-209ENST00000557750 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 COG6Q9Y2V7 657 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 CHMP3Q9Y3E7 222 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 EPHA10Q5JZY3 1008 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
RCCD1-209ENST00000557750 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
RCCD1-209ENST00000557750 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
RCCD1-209ENST00000557750 CACNA1SQ13698 1873 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 FOXO4P98177 505 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
RCCD1-209ENST00000557750 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
RCCD1-209ENST00000557750 GREM2Q9H772 168 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
RCCD1-209ENST00000557750 PASKQ96RG2 1323 aa15.34■□□□□ 0.05
RCCD1-209ENST00000557750 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms