RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
LINC00648-204ENST00000557749 SRGNP10124 158 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 ALDH1B1P30837 517 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 C1QTNF8P60827 252 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 CCDC27Q2M243 656 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 HDGFL1Q5TGJ6 251 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 ANKRD31Q8N7Z5 1873 aa14.78□□□□□ -0.04
LINC00648-204ENST00000557749 KLRG2A4D1S0 409 aaPredicted RBP14.77□□□□□ -0.05
LINC00648-204ENST00000557749 GRIPAP1Q4V328 841 aa14.77□□□□□ -0.05
LINC00648-204ENST00000557749 ZBTB3Q9H5J0 574 aa14.77□□□□□ -0.05
LINC00648-204ENST00000557749 EMILIN3Q9NT22 766 aa14.77□□□□□ -0.05
LINC00648-204ENST00000557749 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
LINC00648-204ENST00000557749 RNF181Q9P0P0 153 aa14.77□□□□□ -0.05
LINC00648-204ENST00000557749 NUP98P52948 1817 aa14.76□□□□□ -0.05
LINC00648-204ENST00000557749 LTBP3Q9NS15 1303 aa14.76□□□□□ -0.05
LINC00648-204ENST00000557749 HLFQ16534 295 aa14.76□□□□□ -0.05
LINC00648-204ENST00000557749 TTLL7Q6ZT98 887 aa14.76□□□□□ -0.05
LINC00648-204ENST00000557749 ZNF853P0CG23 659 aa14.75□□□□□ -0.05
LINC00648-204ENST00000557749 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
LINC00648-204ENST00000557749 PRPF40BQ6NWY9 871 aaKnown RBP14.75□□□□□ -0.05
LINC00648-204ENST00000557749 TMX4Q9H1E5 349 aaPredicted RBP14.75□□□□□ -0.05
LINC00648-204ENST00000557749 TAOK3Q9H2K8 898 aa14.75□□□□□ -0.05
LINC00648-204ENST00000557749 MBIPQ9NS73 344 aa14.75□□□□□ -0.05
LINC00648-204ENST00000557749 ARFGEF2Q9Y6D5 1785 aa14.75□□□□□ -0.05
LINC00648-204ENST00000557749 IL16Q14005 1332 aa14.74□□□□□ -0.05
LINC00648-204ENST00000557749 PDIA6Q15084 440 aa14.74□□□□□ -0.05
LINC00648-204ENST00000557749 CCDC93Q567U6 631 aa14.74□□□□□ -0.05
LINC00648-204ENST00000557749 DUSP27Q5VZP5 1158 aa14.74□□□□□ -0.05
LINC00648-204ENST00000557749 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
LINC00648-204ENST00000557749 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
LINC00648-204ENST00000557749 UTP14AQ9BVJ6 771 aaKnown RBP14.74□□□□□ -0.05
LINC00648-204ENST00000557749 COL11A2P13942 1736 aaPredicted RBP14.74□□□□□ -0.05
LINC00648-204ENST00000557749 SLC34A2O95436 690 aa14.73□□□□□ -0.05
LINC00648-204ENST00000557749 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
LINC00648-204ENST00000557749 CRY2Q49AN0 593 aa14.73□□□□□ -0.05
LINC00648-204ENST00000557749 LCE2DQ5TA82 110 aaPredicted RBP14.73□□□□□ -0.05
LINC00648-204ENST00000557749 COPS6Q7L5N1 327 aa14.73□□□□□ -0.05
LINC00648-204ENST00000557749 LRP10Q7Z4F1 713 aa14.73□□□□□ -0.05
LINC00648-204ENST00000557749 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
LINC00648-204ENST00000557749 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
LINC00648-204ENST00000557749 ZNF526Q8TF50 670 aaPredicted RBP14.73□□□□□ -0.05
LINC00648-204ENST00000557749 FAM177BA6PVY3 158 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 C21orf2O43822 256 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 GPTP24298 496 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 CCDC30Q5VVM6 783 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 PLBD2Q8NHP8 589 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 XAGE3Q8WTP9 111 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 NLRP3Q96P20 1036 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 CHPF2Q9P2E5 772 aa14.72□□□□□ -0.05
LINC00648-204ENST00000557749 DDX58O95786 925 aaKnown RBP14.71□□□□□ -0.05
LINC00648-204ENST00000557749 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
LINC00648-204ENST00000557749 TCIRG1Q13488 830 aa14.71□□□□□ -0.05
LINC00648-204ENST00000557749 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
LINC00648-204ENST00000557749 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
LINC00648-204ENST00000557749 SBF1O95248 1867 aa14.71□□□□□ -0.05
LINC00648-204ENST00000557749 ANKRD36CQ5JPF3 1778 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 UBN2Q6ZU65 1347 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 NFKBIEO00221 500 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 TOMM70O94826 608 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 NTSR2O95665 410 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 HOXA10P31260 410 aaPredicted RBP14.7□□□□□ -0.06
LINC00648-204ENST00000557749 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 SUSD4Q5VX71 490 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 NECTIN2Q92692 538 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 WDR70Q9NW82 654 aa14.7□□□□□ -0.06
LINC00648-204ENST00000557749 TNRC6CQ9HCJ0 1690 aaKnown RBP14.7□□□□□ -0.06
LINC00648-204ENST00000557749 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 SH3TC1Q8TE82 1336 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 RASSF7Q02833 373 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 E2F4Q16254 413 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 ERFEQ4G0M1 354 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 NUTM1Q86Y26 1132 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 OXER1Q8TDS5 423 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 STK31Q9BXU1 1019 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 ABCC12Q96J65 1359 aa14.69□□□□□ -0.06
LINC00648-204ENST00000557749 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 ANXA1P04083 346 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC00648-204ENST00000557749 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 NLRP10Q86W26 655 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 PTCD2Q8WV60 388 aaKnown RBP14.68□□□□□ -0.06
LINC00648-204ENST00000557749 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
LINC00648-204ENST00000557749 SLX4Q8IY92 1834 aa14.68□□□□□ -0.06
LINC00648-204ENST00000557749 TRIM28Q13263 835 aaKnown RBP14.67□□□□□ -0.06
LINC00648-204ENST00000557749 TMC4Q7Z404 712 aa14.67□□□□□ -0.06
LINC00648-204ENST00000557749 RIC3Q7Z5B4 369 aa14.67□□□□□ -0.06
LINC00648-204ENST00000557749 RBM46Q8TBY0 533 aaKnown RBP14.67□□□□□ -0.06
LINC00648-204ENST00000557749 C7orf43Q8WVR3 580 aa14.67□□□□□ -0.06
LINC00648-204ENST00000557749 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
LINC00648-204ENST00000557749 CACNA1SQ13698 1873 aa14.66□□□□□ -0.06
LINC00648-204ENST00000557749 CCDC184Q52MB2 194 aa14.66□□□□□ -0.06
LINC00648-204ENST00000557749 GPR153Q6NV75 609 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms