RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ZBTB3Q9H5J0 574 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
CHD8-214ENST00000557727 MMP10P09238 476 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 AIMP1Q12904 312 aaKnown RBP11.58□□□□□ -0.56
CHD8-214ENST00000557727 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
CHD8-214ENST00000557727 ZNF34Q8IZ26 560 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 C10orf71Q711Q0 1435 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 UBN2Q6ZU65 1347 aa11.58□□□□□ -0.56
CHD8-214ENST00000557727 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
CHD8-214ENST00000557727 PBX2P40425 430 aa11.57□□□□□ -0.56
CHD8-214ENST00000557727 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
CHD8-214ENST00000557727 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
CHD8-214ENST00000557727 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.565e-7■■□□□ 14
CHD8-214ENST00000557727 FLIIQ13045 1269 aa11.57□□□□□ -0.56
CHD8-214ENST00000557727 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
CHD8-214ENST00000557727 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 YTHDC1Q96MU7 727 aaKnown RBP11.56□□□□□ -0.56
CHD8-214ENST00000557727 ISCA1Q9BUE6 129 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 MYH3P11055 1940 aa11.56□□□□□ -0.56
CHD8-214ENST00000557727 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
CHD8-214ENST00000557727 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
CHD8-214ENST00000557727 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
CHD8-214ENST00000557727 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
CHD8-214ENST00000557727 PXDNLA1KZ92 1463 aa11.55□□□□□ -0.56
CHD8-214ENST00000557727 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
CHD8-214ENST00000557727 TCIRG1Q13488 830 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 ARXQ96QS3 562 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 NIP7Q9Y221 180 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHD8-214ENST00000557727 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 TAF1P21675 1872 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
CHD8-214ENST00000557727 BCAR3O75815 825 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 NTSR2O95665 410 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 GPTP24298 496 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
CHD8-214ENST00000557727 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 BICDL1Q6ZP65 573 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 NPM2Q86SE8 214 aaKnown RBP11.53□□□□□ -0.56
CHD8-214ENST00000557727 NLRP10Q86W26 655 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
CHD8-214ENST00000557727 MAP3K2Q9Y2U5 619 aa11.53□□□□□ -0.56
CHD8-214ENST00000557727 GOLGB1Q14789 3259 aaKnown RBP11.53□□□□□ -0.56
CHD8-214ENST00000557727 COL4A1P02462 1669 aa11.52□□□□□ -0.56
CHD8-214ENST00000557727 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
CHD8-214ENST00000557727 F6X3S4 739 aa11.52□□□□□ -0.57
CHD8-214ENST00000557727 SERPINB2P05120 415 aa11.52□□□□□ -0.57
CHD8-214ENST00000557727 POLD1P28340 1107 aa11.52□□□□□ -0.57
CHD8-214ENST00000557727 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
CHD8-214ENST00000557727 SETDB2Q96T68 719 aa11.52□□□□□ -0.57
CHD8-214ENST00000557727 SMC4Q9NTJ3 1288 aa11.52□□□□□ -0.57
CHD8-214ENST00000557727 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 RIC3Q7Z5B4 369 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
CHD8-214ENST00000557727 DNAAF4Q8WXU2 420 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
CHD8-214ENST00000557727 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 PARP3Q9Y6F1 533 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 PTPRCP08575 1304 aa11.51□□□□□ -0.57
CHD8-214ENST00000557727 NEURL1BA8MQ27 555 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
CHD8-214ENST00000557727 FOXK1P85037 733 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
CHD8-214ENST00000557727 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 HSP90AB3PQ58FF7 597 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 BEND3Q5T5X7 828 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 CCDC24Q8N4L8 307 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 MYD88Q99836 296 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
CHD8-214ENST00000557727 CD2APQ9Y5K6 639 aa11.5□□□□□ -0.57
CHD8-214ENST00000557727 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 UTRNP46939 3433 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
CHD8-214ENST00000557727 KCNA3P22001 575 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 CASP7P55210 303 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 ERFEQ4G0M1 354 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
CHD8-214ENST00000557727 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 SYT17Q9BSW7 474 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
CHD8-214ENST00000557727 ABCC4O15439 1325 aa11.49□□□□□ -0.57
CHD8-214ENST00000557727 TRIM27P14373 513 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
CHD8-214ENST00000557727 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms