RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
NEDD1-213ENST00000557644 H0YIN7 160 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
NEDD1-213ENST00000557644 KCNA3P22001 575 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 SF3B3Q15393 1217 aaKnown RBP19.18■□□□□ 0.66
NEDD1-213ENST00000557644 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 TGFB2P61812 414 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 GREM2Q9H772 168 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
NEDD1-213ENST00000557644 LAMB2P55268 1798 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 GNAI2P04899 355 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 COL11A2P13942 1736 aaPredicted RBP19.17■□□□□ 0.66
NEDD1-213ENST00000557644 CSF1RP07333 972 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 FAM161AQ3B820 660 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 RPGRQ92834 1020 aaKnown RBP19.17■□□□□ 0.66
NEDD1-213ENST00000557644 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
NEDD1-213ENST00000557644 SEC31BQ9NQW1 1179 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
NEDD1-213ENST00000557644 RABL6Q3YEC7 729 aaPredicted RBP19.15■□□□□ 0.66
NEDD1-213ENST00000557644 CCDC152Q4G0S7 254 aa19.15■□□□□ 0.66
NEDD1-213ENST00000557644 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
NEDD1-213ENST00000557644 KIAA1551Q9HCM1 1747 aa19.15■□□□□ 0.66
NEDD1-213ENST00000557644 NPR1P16066 1061 aa19.15■□□□□ 0.66
NEDD1-213ENST00000557644 MASTLQ96GX5 879 aa19.15■□□□□ 0.66
NEDD1-213ENST00000557644 COL4A1P02462 1669 aa19.14■□□□□ 0.65
NEDD1-213ENST00000557644 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
NEDD1-213ENST00000557644 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
NEDD1-213ENST00000557644 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
NEDD1-213ENST00000557644 MYH3P11055 1940 aa19.13■□□□□ 0.65
NEDD1-213ENST00000557644 ITGA6P23229 1130 aa19.13■□□□□ 0.65
NEDD1-213ENST00000557644 CELF1Q92879 486 aaKnown RBP19.13■□□□□ 0.65
NEDD1-213ENST00000557644 RBM17Q96I25 401 aaKnown RBP19.13■□□□□ 0.65
NEDD1-213ENST00000557644 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
NEDD1-213ENST00000557644 HDAC5Q9UQL6 1122 aa19.13■□□□□ 0.65
NEDD1-213ENST00000557644 STYK1Q6J9G0 422 aa19.12■□□□□ 0.65
NEDD1-213ENST00000557644 TAF1P21675 1872 aa19.12■□□□□ 0.65
NEDD1-213ENST00000557644 PNMA6EA0A0J9YXQ4 647 aa19.11■□□□□ 0.65
NEDD1-213ENST00000557644 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
NEDD1-213ENST00000557644 KLHDC4Q8TBB5 520 aa19.11■□□□□ 0.65
NEDD1-213ENST00000557644 ZNF594Q96JF6 807 aaPredicted RBP19.11■□□□□ 0.65
NEDD1-213ENST00000557644 PIM2Q9P1W9 311 aa19.11■□□□□ 0.65
NEDD1-213ENST00000557644 IFIT5Q13325 482 aaKnown RBP19.1■□□□□ 0.65
NEDD1-213ENST00000557644 GRAPQ13588 217 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 CCDC57Q2TAC2 916 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-213ENST00000557644 CRAMP1Q96RY5 1269 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 RTL9Q8NET4 1388 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 SRGAP3O43295 1099 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 PRPF40BQ6NWY9 871 aaKnown RBP19.1■□□□□ 0.65
NEDD1-213ENST00000557644 TTLL6Q8N841 843 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 CNKSR1Q969H4 720 aa19.1■□□□□ 0.65
NEDD1-213ENST00000557644 ANKRD18BA2A2Z9 1011 aa19.09■□□□□ 0.65
NEDD1-213ENST00000557644 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
NEDD1-213ENST00000557644 ALDH1B1P30837 517 aa19.08■□□□□ 0.65
NEDD1-213ENST00000557644 MTX1Q13505 466 aa19.08■□□□□ 0.65
NEDD1-213ENST00000557644 OLFM4Q6UX06 510 aa19.08■□□□□ 0.65
NEDD1-213ENST00000557644 DLEC1Q9Y238 1755 aa19.08■□□□□ 0.65
NEDD1-213ENST00000557644 RFX5P48382 616 aaPredicted RBP19.08■□□□□ 0.64
NEDD1-213ENST00000557644 RPS8P62241 208 aaKnown RBP19.08■□□□□ 0.64
NEDD1-213ENST00000557644 SIRT2Q8IXJ6 389 aa19.08■□□□□ 0.64
NEDD1-213ENST00000557644 PCDHB15Q9Y5E8 787 aa19.08■□□□□ 0.64
NEDD1-213ENST00000557644 ATP8B2P98198 1209 aa19.07■□□□□ 0.64
NEDD1-213ENST00000557644 DALRD3Q5D0E6 543 aaKnown RBP19.07■□□□□ 0.64
NEDD1-213ENST00000557644 CDC5LQ99459 802 aaKnown RBP19.07■□□□□ 0.64
NEDD1-213ENST00000557644 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
NEDD1-213ENST00000557644 ANKRD18AQ8IVF6 992 aa19.07■□□□□ 0.64
NEDD1-213ENST00000557644 PA2G4Q9UQ80 394 aaKnown RBP19.07■□□□□ 0.64
NEDD1-213ENST00000557644 SLX4Q8IY92 1834 aa19.06■□□□□ 0.64
NEDD1-213ENST00000557644 BRCA1P38398 1863 aaKnown RBP19.06■□□□□ 0.64
NEDD1-213ENST00000557644 PPEF1O14829 653 aaPredicted RBP19.06■□□□□ 0.64
NEDD1-213ENST00000557644 PTPN12Q05209 780 aaKnown RBP19.06■□□□□ 0.64
NEDD1-213ENST00000557644 TAF7LQ5H9L4 462 aa19.06■□□□□ 0.64
NEDD1-213ENST00000557644 C21orf2O43822 256 aa19.05■□□□□ 0.64
NEDD1-213ENST00000557644 BBOX1O75936 387 aa19.05■□□□□ 0.64
NEDD1-213ENST00000557644 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
NEDD1-213ENST00000557644 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
NEDD1-213ENST00000557644 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
NEDD1-213ENST00000557644 PUS3Q9BZE2 481 aaKnown RBP19.05■□□□□ 0.64
NEDD1-213ENST00000557644 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
NEDD1-213ENST00000557644 POLA2Q14181 598 aa19.04■□□□□ 0.64
NEDD1-213ENST00000557644 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-213ENST00000557644 SSH3Q8TE77 659 aa19.04■□□□□ 0.64
NEDD1-213ENST00000557644 SIL1Q9H173 461 aa19.04■□□□□ 0.64
NEDD1-213ENST00000557644 MPHOSPH8Q99549 860 aa19.04■□□□□ 0.64
NEDD1-213ENST00000557644 YBX3P16989 372 aaKnown RBP eCLIP19.03■□□□□ 0.643e-8■□□□□ 10.5
NEDD1-213ENST00000557644 LRRC24Q50LG9 513 aa19.03■□□□□ 0.64
NEDD1-213ENST00000557644 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
NEDD1-213ENST00000557644 BSDC1Q9NW68 430 aaPredicted RBP19.03■□□□□ 0.64
NEDD1-213ENST00000557644 NEFLP07196 543 aa19.03■□□□□ 0.64
NEDD1-213ENST00000557644 ATP6V0A2Q9Y487 856 aa19.03■□□□□ 0.64
NEDD1-213ENST00000557644 COPRSQ9NQ92 184 aa19.01■□□□□ 0.63
NEDD1-213ENST00000557644 CNNM1Q9NRU3 951 aa19.01■□□□□ 0.63
NEDD1-213ENST00000557644 SPEF2Q9C093 1822 aa19.01■□□□□ 0.63
NEDD1-213ENST00000557644 MINPP1Q9UNW1 487 aa19.01■□□□□ 0.63
NEDD1-213ENST00000557644 SP8Q8IXZ3 490 aa19■□□□□ 0.63
NEDD1-213ENST00000557644 AAMPQ13685 434 aa19■□□□□ 0.63
NEDD1-213ENST00000557644 RIPOR2Q9Y4F9 1068 aa19■□□□□ 0.63
NEDD1-213ENST00000557644 ATG9AQ7Z3C6 839 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms