RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 PPLO60437 1756 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 ACEP12821 1306 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 H3BM21 787 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 RAD21O60216 631 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 NBPF20Q3BBV1 942 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 WWC1Q8IX03 1113 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 TRMT44Q8IYL2 757 aaKnown RBP7.07□□□□□ -1.28
ATXN3-247ENST00000557311 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-247ENST00000557311 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-247ENST00000557311 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-247ENST00000557311 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 SOBPA7XYQ1 873 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 GIGYF1O75420 1035 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-247ENST00000557311 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-247ENST00000557311 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 CCDC116Q8IYX3 515 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 MPNDQ8N594 471 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 ARXQ96QS3 562 aa7.06□□□□□ -1.28
ATXN3-247ENST00000557311 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 UPP2O95045 317 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 NR3C2P08235 984 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 TIMP2P16035 220 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 GRM5P41594 1212 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 NR1H3Q13133 447 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 MCM6Q14566 821 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-247ENST00000557311 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 MAP4K5Q9Y4K4 846 aa7.05□□□□□ -1.28
ATXN3-247ENST00000557311 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-247ENST00000557311 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-247ENST00000557311 USP19O94966 1318 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 DHX9Q08211 1270 aaKnown RBP7.04□□□□□ -1.28
ATXN3-247ENST00000557311 FLIIQ13045 1269 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
ATXN3-247ENST00000557311 ZSCAN1Q8NBB4 408 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 ZNF592Q92610 1267 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 IRF7Q92985 503 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 PURBQ96QR8 312 aaKnown RBP7.04□□□□□ -1.28
ATXN3-247ENST00000557311 OCSTAMPQ9BR26 566 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 EMILIN1Q9Y6C2 1016 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 TULP4Q9NRJ4 1543 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 ATP7BP35670 1465 aa7.04□□□□□ -1.28
ATXN3-247ENST00000557311 BCL9O00512 1426 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 CRB1P82279 1406 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 ZBTB7CA1YPR0 619 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 SCARF1Q14162 830 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-247ENST00000557311 ITPKCQ96DU7 683 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 AATKQ6ZMQ8 1374 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 ALS2Q96Q42 1657 aa7.03□□□□□ -1.28
ATXN3-247ENST00000557311 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
ATXN3-247ENST00000557311 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-247ENST00000557311 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATXN3-247ENST00000557311 VAC14Q08AM6 782 aa7.02□□□□□ -1.29
ATXN3-247ENST00000557311 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
ATXN3-247ENST00000557311 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-247ENST00000557311 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
ATXN3-247ENST00000557311 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-247ENST00000557311 RREB1Q92766 1687 aa7.01□□□□□ -1.29
ATXN3-247ENST00000557311 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-247ENST00000557311 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
ATXN3-247ENST00000557311 CSB-PGBD3P0DP91 1061 aa7.01□□□□□ -1.29
ATXN3-247ENST00000557311 POLD1P28340 1107 aa7.01□□□□□ -1.29
ATXN3-247ENST00000557311 INTS6LQ5JSJ4 861 aaKnown RBP7.01□□□□□ -1.29
ATXN3-247ENST00000557311 ADGRB1O14514 1584 aa7□□□□□ -1.29
ATXN3-247ENST00000557311 BMP2P12643 396 aa7□□□□□ -1.29
ATXN3-247ENST00000557311 SRPK2P78362 688 aaKnown RBP7□□□□□ -1.29
ATXN3-247ENST00000557311 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
ATXN3-247ENST00000557311 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
ATXN3-247ENST00000557311 IFT172Q9UG01 1749 aa7□□□□□ -1.29
ATXN3-247ENST00000557311 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 MCCD1P59942 119 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-247ENST00000557311 CBLBQ13191 982 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 SEMA3FQ13275 785 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 WASHC4Q2M389 1173 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 RNF20Q5VTR2 975 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 CYLDQ9NQC7 956 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 CABP1Q9NZU7 370 aa6.99□□□□□ -1.29
ATXN3-247ENST00000557311 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms