RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 PARP10Q53GL7 1025 aa24.4■■□□□ 1.5
PRKCH-223ENST00000557294 DPP8Q6V1X1 898 aaPredicted RBP24.4■■□□□ 1.5
PRKCH-223ENST00000557294 RAD17O75943 681 aa24.39■■□□□ 1.49
PRKCH-223ENST00000557294 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.49
PRKCH-223ENST00000557294 USP48Q86UV5 1035 aa24.39■■□□□ 1.49
PRKCH-223ENST00000557294 MPNDQ8N594 471 aa24.39■■□□□ 1.49
PRKCH-223ENST00000557294 TRPM4Q8TD43 1214 aa24.39■■□□□ 1.49
PRKCH-223ENST00000557294 SAGE1Q9NXZ1 904 aa24.39■■□□□ 1.49
PRKCH-223ENST00000557294 ABCC4O15439 1325 aa24.38■■□□□ 1.49
PRKCH-223ENST00000557294 H7C1D1 291 aa24.38■■□□□ 1.49
PRKCH-223ENST00000557294 RGMBQ6NW40 437 aa24.37■■□□□ 1.49
PRKCH-223ENST00000557294 UTP14AQ9BVJ6 771 aaKnown RBP24.37■■□□□ 1.49
PRKCH-223ENST00000557294 FAM155AB1AL88 458 aaPredicted RBP24.36■■□□□ 1.49
PRKCH-223ENST00000557294 CCDC102AQ96A19 550 aa24.36■■□□□ 1.49
PRKCH-223ENST00000557294 SHTN1A0MZ66 631 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 SOX10P56693 466 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 KIF23Q02241 960 aaPredicted RBP24.34■■□□□ 1.49
PRKCH-223ENST00000557294 DLK2Q6UY11 383 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 MICALL2Q8IY33 904 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 DPF2Q92785 391 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 PDE4DIPQ5VU43 2346 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 LAMB4A4D0S4 1761 aa24.34■■□□□ 1.49
PRKCH-223ENST00000557294 YDJCA8MPS7 323 aa24.33■■□□□ 1.49
PRKCH-223ENST00000557294 C2orf69Q8N8R5 385 aa24.33■■□□□ 1.49
PRKCH-223ENST00000557294 RNF186Q9NXI6 227 aa24.33■■□□□ 1.49
PRKCH-223ENST00000557294 ERBB4Q15303 1308 aa24.33■■□□□ 1.48
PRKCH-223ENST00000557294 GBA2Q9HCG7 927 aaPredicted RBP24.32■■□□□ 1.48
PRKCH-223ENST00000557294 TRPA1O75762 1119 aa24.31■■□□□ 1.48
PRKCH-223ENST00000557294 SAMD7Q7Z3H4 446 aa24.31■■□□□ 1.48
PRKCH-223ENST00000557294 KRT26Q7Z3Y9 468 aa24.31■■□□□ 1.48
PRKCH-223ENST00000557294 ZBTB12Q9Y330 459 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-223ENST00000557294 PPP2R1AP30153 589 aa24.3■■□□□ 1.48
PRKCH-223ENST00000557294 ZNF157P51786 506 aaPredicted RBP24.3■■□□□ 1.48
PRKCH-223ENST00000557294 PRPF38BQ5VTL8 546 aaKnown RBP24.3■■□□□ 1.48
PRKCH-223ENST00000557294 DDX46Q7L014 1031 aaKnown RBP24.3■■□□□ 1.48
PRKCH-223ENST00000557294 LRP10Q7Z4F1 713 aa24.29■■□□□ 1.48
PRKCH-223ENST00000557294 GRAPQ13588 217 aa24.28■■□□□ 1.48
PRKCH-223ENST00000557294 TMC4Q7Z404 712 aa24.28■■□□□ 1.48
PRKCH-223ENST00000557294 GRAPLQ8TC17 118 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-223ENST00000557294 DCPSQ96C86 337 aaKnown RBP24.28■■□□□ 1.48
PRKCH-223ENST00000557294 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
PRKCH-223ENST00000557294 PSMD14O00487 310 aa24.27■■□□□ 1.48
PRKCH-223ENST00000557294 HCLS1P14317 486 aaPredicted RBP24.27■■□□□ 1.48
PRKCH-223ENST00000557294 PDIA6Q15084 440 aa24.27■■□□□ 1.48
PRKCH-223ENST00000557294 CTU1Q7Z7A3 348 aaKnown RBP24.27■■□□□ 1.48
PRKCH-223ENST00000557294 THUMPD2Q9BTF0 503 aaKnown RBP24.27■■□□□ 1.48
PRKCH-223ENST00000557294 NEFMP07197 916 aa24.26■■□□□ 1.47
PRKCH-223ENST00000557294 TBC1D10BQ4KMP7 808 aaPredicted RBP24.26■■□□□ 1.47
PRKCH-223ENST00000557294 EGFRP00533 1210 aa24.25■■□□□ 1.47
PRKCH-223ENST00000557294 RPS12P25398 132 aaKnown RBP24.25■■□□□ 1.47
PRKCH-223ENST00000557294 WASHC4Q2M389 1173 aa24.25■■□□□ 1.47
PRKCH-223ENST00000557294 NLRP10Q86W26 655 aa24.25■■□□□ 1.47
PRKCH-223ENST00000557294 REM2Q8IYK8 340 aaPredicted RBP24.25■■□□□ 1.47
PRKCH-223ENST00000557294 KDM3BQ7LBC6 1761 aa24.24■■□□□ 1.47
PRKCH-223ENST00000557294 HSP90AB3PQ58FF7 597 aa24.24■■□□□ 1.47
PRKCH-223ENST00000557294 ADM5C9JUS6 153 aa24.23■■□□□ 1.47
PRKCH-223ENST00000557294 SLC10A3P09131 477 aa24.23■■□□□ 1.47
PRKCH-223ENST00000557294 RBM26Q5T8P6 1007 aaKnown RBP24.23■■□□□ 1.47
PRKCH-223ENST00000557294 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
PRKCH-223ENST00000557294 TRMT112Q9UI30 125 aaKnown RBP24.23■■□□□ 1.47
PRKCH-223ENST00000557294 DBNDD1Q9H9R9 158 aa24.22■■□□□ 1.47
PRKCH-223ENST00000557294 SH3TC1Q8TE82 1336 aa24.21■■□□□ 1.47
PRKCH-223ENST00000557294 EIF2S2P20042 333 aaKnown RBP24.21■■□□□ 1.47
PRKCH-223ENST00000557294 PLEKHF1Q96S99 279 aa24.21■■□□□ 1.47
PRKCH-223ENST00000557294 NSFL1CQ9UNZ2 370 aaKnown RBP24.21■■□□□ 1.47
PRKCH-223ENST00000557294 TCIRG1Q13488 830 aa24.2■■□□□ 1.46
PRKCH-223ENST00000557294 PROSER3Q2NL68 480 aa24.2■■□□□ 1.46
PRKCH-223ENST00000557294 COPS6Q7L5N1 327 aa24.2■■□□□ 1.46
PRKCH-223ENST00000557294 SULF1Q8IWU6 871 aa24.2■■□□□ 1.46
PRKCH-223ENST00000557294 ANKRD36CQ5JPF3 1778 aa24.19■■□□□ 1.46
PRKCH-223ENST00000557294 RIMBP2O15034 1052 aa24.19■■□□□ 1.46
PRKCH-223ENST00000557294 NFE2L2Q16236 605 aa24.19■■□□□ 1.46
PRKCH-223ENST00000557294 PKN2Q16513 984 aaKnown RBP24.19■■□□□ 1.46
PRKCH-223ENST00000557294 KCNQ5Q9NR82 932 aa24.19■■□□□ 1.46
PRKCH-223ENST00000557294 HPS5Q9UPZ3 1129 aa24.19■■□□□ 1.46
PRKCH-223ENST00000557294 DUOX1Q9NRD9 1551 aa24.18■■□□□ 1.46
PRKCH-223ENST00000557294 ANXA1P04083 346 aa24.18■■□□□ 1.46
PRKCH-223ENST00000557294 POLLQ9UGP5 575 aa24.18■■□□□ 1.46
PRKCH-223ENST00000557294 POLR2AP24928 1970 aaKnown RBP24.17■■□□□ 1.46
PRKCH-223ENST00000557294 C6orf229H3BNL8 230 aa24.17■■□□□ 1.46
PRKCH-223ENST00000557294 ECE2O60344 883 aa24.17■■□□□ 1.46
PRKCH-223ENST00000557294 KIF4BQ2VIQ3 1234 aa24.17■■□□□ 1.46
PRKCH-223ENST00000557294 TSPYL4Q9UJ04 414 aa24.17■■□□□ 1.46
PRKCH-223ENST00000557294 AIMP1Q12904 312 aaKnown RBP24.16■■□□□ 1.46
PRKCH-223ENST00000557294 CDCA5Q96FF9 252 aa24.16■■□□□ 1.46
PRKCH-223ENST00000557294 EYA3Q99504 573 aa24.16■■□□□ 1.46
PRKCH-223ENST00000557294 RTL9Q8NET4 1388 aa24.16■■□□□ 1.46
PRKCH-223ENST00000557294 AKAP11Q9UKA4 1901 aa24.16■■□□□ 1.46
PRKCH-223ENST00000557294 VIL1P09327 827 aaKnown RBP24.15■■□□□ 1.46
PRKCH-223ENST00000557294 SF3B3Q15393 1217 aaKnown RBP24.15■■□□□ 1.46
PRKCH-223ENST00000557294 DOK7Q18PE1 504 aa24.15■■□□□ 1.46
PRKCH-223ENST00000557294 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
PRKCH-223ENST00000557294 CELF1Q92879 486 aaKnown RBP24.15■■□□□ 1.46
PRKCH-223ENST00000557294 GGA3Q9NZ52 723 aa24.15■■□□□ 1.46
PRKCH-223ENST00000557294 LAMB2P55268 1798 aa24.15■■□□□ 1.46
PRKCH-223ENST00000557294 FKBP1BP68106 108 aa24.14■■□□□ 1.45
PRKCH-223ENST00000557294 GPSM2P81274 684 aa24.14■■□□□ 1.45
PRKCH-223ENST00000557294 RASAL3Q86YV0 1011 aa24.14■■□□□ 1.45
PRKCH-223ENST00000557294 BABAM1Q9NWV8 329 aa24.13■■□□□ 1.45
PRKCH-223ENST00000557294 HDAC9Q9UKV0 1011 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms