RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 NDUFB9Q9Y6M9 179 aa13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 TJP1Q07157 1748 aa13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
HNRNPC-228ENST00000557033 PPP1R12CQ9BZL4 782 aa13.03□□□□□ -0.32
HNRNPC-228ENST00000557033 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 STARD3NLO95772 234 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 TGFB2P61812 414 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
HNRNPC-228ENST00000557033 ZPR1O75312 459 aa13.01□□□□□ -0.33
HNRNPC-228ENST00000557033 NEFMP07197 916 aa13.01□□□□□ -0.33
HNRNPC-228ENST00000557033 RALBP1Q15311 655 aa13.01□□□□□ -0.33
HNRNPC-228ENST00000557033 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-228ENST00000557033 FAM198AQ9UFP1 575 aa13.01□□□□□ -0.33
HNRNPC-228ENST00000557033 UBR2Q8IWV8 1755 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
HNRNPC-228ENST00000557033 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 ZNF784Q8NCA9 323 aaPredicted RBP13□□□□□ -0.33
HNRNPC-228ENST00000557033 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
HNRNPC-228ENST00000557033 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 NARFQ9UHQ1 456 aa13□□□□□ -0.33
HNRNPC-228ENST00000557033 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 CARNS1A5YM72 827 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 IGSF3O75054 1194 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 TM4SF1P30408 202 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
HNRNPC-228ENST00000557033 UTRNP46939 3433 aa12.98□□□□□ -0.33
HNRNPC-228ENST00000557033 A0A087WZG4 1122 aa12.98□□□□□ -0.33
HNRNPC-228ENST00000557033 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
HNRNPC-228ENST00000557033 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
HNRNPC-228ENST00000557033 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
HNRNPC-228ENST00000557033 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 EVX2Q03828 476 aa12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 MCM10Q7L590 875 aa12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 ALG2Q9H553 416 aa12.97□□□□□ -0.33
HNRNPC-228ENST00000557033 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 COL15A1P39059 1388 aa12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 GPR37L1O60883 481 aa12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 IL6STP40189 918 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 PLEKHF1Q96S99 279 aa12.96□□□□□ -0.33
HNRNPC-228ENST00000557033 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 KCNQ3O43525 872 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 DDR1Q08345 913 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
HNRNPC-228ENST00000557033 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 DPEP1P16444 411 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 DNAJB2P25686 324 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 NFIXQ14938 502 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
HNRNPC-228ENST00000557033 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 KCNA3P22001 575 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 NFE2L2Q16236 605 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
HNRNPC-228ENST00000557033 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 KDM4AO75164 1064 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 A1BGP04217 495 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 SERPINB2P05120 415 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
HNRNPC-228ENST00000557033 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-228ENST00000557033 ATG7O95352 703 aa12.91□□□□□ -0.34
HNRNPC-228ENST00000557033 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
HNRNPC-228ENST00000557033 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
HNRNPC-228ENST00000557033 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-228ENST00000557033 TMEM88BA6NKF7 163 aa12.9□□□□□ -0.34
HNRNPC-228ENST00000557033 C3orf80F5H4A9 247 aa12.9□□□□□ -0.34
HNRNPC-228ENST00000557033 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms