RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 ESPNB1AK53 854 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 CFAP70Q5T0N1 1121 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 WAPLQ7Z5K2 1190 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
PRPF39-211ENST00000556782 SEPT12Q8IYM1 358 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 LRRC59Q96AG4 307 aaKnown RBP7.87□□□□□ -1.15
PRPF39-211ENST00000556782 ORAI2Q96SN7 254 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 ADGRB1O14514 1584 aa7.87□□□□□ -1.15
PRPF39-211ENST00000556782 FMN2Q9NZ56 1722 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 DHX57Q6P158 1386 aaKnown RBP7.86□□□□□ -1.15
PRPF39-211ENST00000556782 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 ATP5J2-PTCD1G3V325 749 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 MEN1O00255 615 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 MEX3CQ5U5Q3 659 aaKnown RBP7.86□□□□□ -1.15
PRPF39-211ENST00000556782 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 MKL2Q9ULH7 1088 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 DLC1Q96QB1 1528 aa7.86□□□□□ -1.15
PRPF39-211ENST00000556782 FURINP09958 794 aa7.85□□□□□ -1.15
PRPF39-211ENST00000556782 MAP2K3P46734 347 aa7.85□□□□□ -1.15
PRPF39-211ENST00000556782 SNRPNP63162 240 aaKnown RBP7.85□□□□□ -1.15
PRPF39-211ENST00000556782 OXCT2Q9BYC2 517 aaPredicted RBP7.85□□□□□ -1.15
PRPF39-211ENST00000556782 PXDNQ92626 1479 aa7.85□□□□□ -1.15
PRPF39-211ENST00000556782 NPHP3Q7Z494 1330 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 KIF1AQ12756 1690 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 RFC5P40937 340 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 POU4F2Q12837 409 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 SLC27A3Q5K4L6 730 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 COL22A1Q8NFW1 1626 aaPredicted RBP7.84□□□□□ -1.15
PRPF39-211ENST00000556782 ADGRB2O60241 1585 aa7.84□□□□□ -1.15
PRPF39-211ENST00000556782 AP1G2O75843 785 aa7.83□□□□□ -1.16
PRPF39-211ENST00000556782 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
PRPF39-211ENST00000556782 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
PRPF39-211ENST00000556782 PRAM1Q96QH2 718 aa7.83□□□□□ -1.16
PRPF39-211ENST00000556782 AFF2P51816 1311 aa7.82□□□□□ -1.16
PRPF39-211ENST00000556782 A0A1W2PRU2 124 aa7.82□□□□□ -1.16
PRPF39-211ENST00000556782 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
PRPF39-211ENST00000556782 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
PRPF39-211ENST00000556782 NUCKS1Q9H1E3 243 aaKnown RBP7.82□□□□□ -1.16
PRPF39-211ENST00000556782 HMX1Q9NP08 348 aaPredicted RBP7.82□□□□□ -1.16
PRPF39-211ENST00000556782 USP32Q8NFA0 1604 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 ANKARQ7Z5J8 1434 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 FOXO3O43524 673 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 SAFB2Q14151 953 aaKnown RBP eCLIP7.81□□□□□ -1.16
PRPF39-211ENST00000556782 WDR44Q5JSH3 913 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
PRPF39-211ENST00000556782 NBPF15Q8N660 670 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 EPS8L1Q8TE68 723 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 C8orf37Q96NL8 207 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 RRAGCQ9HB90 399 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 POGKQ9P215 609 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 TRAK1Q9UPV9 953 aa7.81□□□□□ -1.16
PRPF39-211ENST00000556782 ARHGEF28Q8N1W1 1705 aaKnown RBP7.81□□□□□ -1.16
PRPF39-211ENST00000556782 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 F11P03951 625 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 XPCQ01831 940 aaPredicted RBP7.8□□□□□ -1.16
PRPF39-211ENST00000556782 PCMTD1Q96MG8 357 aaPredicted RBP7.8□□□□□ -1.16
PRPF39-211ENST00000556782 CFHR5Q9BXR6 569 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 TRIM34Q9BYJ4 488 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 TIMMDC1Q9NPL8 285 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 KIAA1210Q9ULL0 1709 aa7.8□□□□□ -1.16
PRPF39-211ENST00000556782 CDK12Q9NYV4 1490 aaPredicted RBP7.8□□□□□ -1.16
PRPF39-211ENST00000556782 TULP4Q9NRJ4 1543 aa7.79□□□□□ -1.16
PRPF39-211ENST00000556782 COL8A1P27658 744 aa7.79□□□□□ -1.16
PRPF39-211ENST00000556782 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
PRPF39-211ENST00000556782 GDF2Q9UK05 429 aaPredicted RBP7.79□□□□□ -1.16
PRPF39-211ENST00000556782 EIF3AQ14152 1382 aaKnown RBP7.79□□□□□ -1.16
PRPF39-211ENST00000556782 RGPD8O14715 1765 aaPredicted RBP7.79□□□□□ -1.16
PRPF39-211ENST00000556782 SPATA31A3Q5VYP0 1347 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 TNS3Q68CZ2 1445 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 RXRBP28702 533 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-211ENST00000556782 GRIN2CQ14957 1233 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 KRT28Q7Z3Y7 464 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 EDARADDQ8WWZ3 215 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 KLRG1Q96E93 195 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-211ENST00000556782 PHF24Q9UPV7 400 aa7.78□□□□□ -1.16
PRPF39-211ENST00000556782 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 SPATA31C2B4DYI2 1134 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 PIK3R2O00459 728 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
PRPF39-211ENST00000556782 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 TAS1R3Q7RTX0 852 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
PRPF39-211ENST00000556782 MARF1Q9Y4F3 1742 aaKnown RBP7.77□□□□□ -1.17
PRPF39-211ENST00000556782 RGS12O14924 1447 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
PRPF39-211ENST00000556782 ATP7BP35670 1465 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 ABCA3Q99758 1704 aa7.76□□□□□ -1.17
PRPF39-211ENST00000556782 TRPM3Q9HCF6 1732 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 WASLO00401 505 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-211ENST00000556782 RBM6P78332 1123 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms