RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CD163Q86VB7 1156 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 PLPP7Q8NBV4 271 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 FBXO41Q8TF61 875 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 ZMYND15Q9H091 742 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
CPSF2-205ENST00000556622 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 SPATA31D1Q6ZQQ2 1576 aa8.21□□□□□ -1.1
CPSF2-205ENST00000556622 PLA2R1Q13018 1463 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 VWDEQ8N2E2 1590 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 GNRH1P01148 92 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 GPC1P35052 558 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 LINC00114Q6XXX2 140 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 CYP2U1Q7Z449 544 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
CPSF2-205ENST00000556622 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 UCN2Q96RP3 112 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 SEMA6BQ9H3T3 888 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
CPSF2-205ENST00000556622 ZNF335Q9H4Z2 1342 aaPredicted RBP8.2□□□□□ -1.1
CPSF2-205ENST00000556622 ZNF142P52746 1687 aaPredicted RBP8.19□□□□□ -1.1
CPSF2-205ENST00000556622 PIK3CDO00329 1044 aa8.19□□□□□ -1.1
CPSF2-205ENST00000556622 CHRNA4P43681 627 aa8.19□□□□□ -1.1
CPSF2-205ENST00000556622 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPSF2-205ENST00000556622 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
CPSF2-205ENST00000556622 PLEKHM2Q8IWE5 1019 aa8.19□□□□□ -1.1
CPSF2-205ENST00000556622 KLRG1Q96E93 195 aa8.19□□□□□ -1.1
CPSF2-205ENST00000556622 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
CPSF2-205ENST00000556622 NOS1P29475 1434 aa8.19□□□□□ -1.1
CPSF2-205ENST00000556622 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
CPSF2-205ENST00000556622 MAP2K3P46734 347 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 CLN3Q13286 438 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 ZMYM1Q5SVZ6 1142 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPSF2-205ENST00000556622 GLMNQ92990 594 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 CCDC7Q96M83 1385 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 TMEM2Q9UHN6 1383 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 TET3O43151 1660 aa8.18□□□□□ -1.1
CPSF2-205ENST00000556622 POLR1AO95602 1720 aaPredicted RBP8.17□□□□□ -1.1
CPSF2-205ENST00000556622 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
CPSF2-205ENST00000556622 NBPF15Q8N660 670 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 XAGE2Q96GT9 111 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 KRTAP9-9Q9BYP9 154 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 KRTAP9-4Q9BYQ2 154 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 ZBED9Q6R2W3 1325 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
CPSF2-205ENST00000556622 EFCAB6Q5THR3 1501 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 UNC13BO14795 1591 aa8.17□□□□□ -1.1
CPSF2-205ENST00000556622 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
CPSF2-205ENST00000556622 ATP9BO43861 1147 aa8.16□□□□□ -1.1
CPSF2-205ENST00000556622 DOC2BQ14184 412 aa8.16□□□□□ -1.1
CPSF2-205ENST00000556622 FOXD4L6Q3SYB3 417 aaPredicted RBP8.16□□□□□ -1.1
CPSF2-205ENST00000556622 FOXD4L3Q6VB84 417 aaPredicted RBP8.16□□□□□ -1.1
CPSF2-205ENST00000556622 PRKRIP1Q9H875 184 aaPredicted RBP8.16□□□□□ -1.1
CPSF2-205ENST00000556622 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
CPSF2-205ENST00000556622 UBR1Q8IWV7 1749 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 PIK3C2BO00750 1634 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 IQGAP3Q86VI3 1631 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 SKIP12755 728 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 ESYT1Q9BSJ8 1104 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 MRS2Q9HD23 443 aa8.15□□□□□ -1.1
CPSF2-205ENST00000556622 E9PCH4 1651 aa8.14□□□□□ -1.11
CPSF2-205ENST00000556622 SYNMO15061 1565 aa8.14□□□□□ -1.11
CPSF2-205ENST00000556622 SCAF11Q99590 1463 aaKnown RBP8.14□□□□□ -1.11
CPSF2-205ENST00000556622 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
CPSF2-205ENST00000556622 RALBP1Q15311 655 aa8.14□□□□□ -1.11
CPSF2-205ENST00000556622 SLC27A3Q5K4L6 730 aa8.14□□□□□ -1.11
CPSF2-205ENST00000556622 MED14O60244 1454 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 SPATA31E1Q6ZUB1 1445 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 IL2RAP01589 272 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 EML3Q32P44 896 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 RGL3Q3MIN7 710 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 SLIT1O75093 1534 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
CPSF2-205ENST00000556622 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 C2CD2LO14523 706 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 TOM1O60784 492 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 F11P03951 625 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 KCNA6P17658 529 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 AMPD1P23109 780 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 SCNN1DP51172 638 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 NCOA4Q13772 614 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
CPSF2-205ENST00000556622 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 ANP32EQ9BTT0 268 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
CPSF2-205ENST00000556622 PPP1R12CQ9BZL4 782 aa8.12□□□□□ -1.11
CPSF2-205ENST00000556622 NOD1Q9Y239 953 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms