RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SEC24BO95487 1268 aa13.33□□□□□ -0.28
LINC01550-206ENST00000556462 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
LINC01550-206ENST00000556462 UBR3Q6ZT12 1888 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 EYA2O00167 538 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 ITGA6P23229 1130 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 TFCP2Q12800 502 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
LINC01550-206ENST00000556462 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
LINC01550-206ENST00000556462 CIAO1O76071 339 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
LINC01550-206ENST00000556462 C4AP0C0L4 1744 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 GYS1P13807 737 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 SDSP20132 328 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
LINC01550-206ENST00000556462 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 AACSQ86V21 672 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
LINC01550-206ENST00000556462 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
LINC01550-206ENST00000556462 AOX1Q06278 1338 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 HSP90B1P14625 803 aaKnown RBP13.3□□□□□ -0.28
LINC01550-206ENST00000556462 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
LINC01550-206ENST00000556462 NFIXQ14938 502 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 TNNI3KQ59H18 835 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 CCDC8Q9H0W5 538 aaPredicted RBP13.3□□□□□ -0.28
LINC01550-206ENST00000556462 FPGT-TNNI3KV9GXZ4 949 aa13.3□□□□□ -0.28
LINC01550-206ENST00000556462 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
LINC01550-206ENST00000556462 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
LINC01550-206ENST00000556462 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
LINC01550-206ENST00000556462 TLR7Q9NYK1 1049 aaKnown RBP13.29□□□□□ -0.28
LINC01550-206ENST00000556462 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
LINC01550-206ENST00000556462 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
LINC01550-206ENST00000556462 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
LINC01550-206ENST00000556462 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 DDX60Q8IY21 1712 aaKnown RBP13.28□□□□□ -0.28
LINC01550-206ENST00000556462 MYH3P11055 1940 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 TM4SF1P30408 202 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
LINC01550-206ENST00000556462 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
LINC01550-206ENST00000556462 CCDC152Q4G0S7 254 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 LDHAL6AQ6ZMR3 332 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 TBC1D9Q6ZT07 1266 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 SEC31BQ9NQW1 1179 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
LINC01550-206ENST00000556462 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.28
LINC01550-206ENST00000556462 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.28
LINC01550-206ENST00000556462 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.28
LINC01550-206ENST00000556462 DBNLQ9UJU6 430 aaKnown RBP13.27□□□□□ -0.28
LINC01550-206ENST00000556462 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.29
LINC01550-206ENST00000556462 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
LINC01550-206ENST00000556462 CARMIL3Q8ND23 1372 aa13.26□□□□□ -0.29
LINC01550-206ENST00000556462 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
LINC01550-206ENST00000556462 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
LINC01550-206ENST00000556462 CDC45O75419 566 aa13.26□□□□□ -0.29
LINC01550-206ENST00000556462 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
LINC01550-206ENST00000556462 TIMM10P62072 90 aa13.26□□□□□ -0.29
LINC01550-206ENST00000556462 CCDC24Q8N4L8 307 aa13.26□□□□□ -0.29
LINC01550-206ENST00000556462 ERC2O15083 957 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 LAMB2P55268 1798 aa13.25□□□□□ -0.29
LINC01550-206ENST00000556462 PNPLA7Q6ZV29 1317 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
LINC01550-206ENST00000556462 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
LINC01550-206ENST00000556462 SERPINB2P05120 415 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 NEUROD6Q96NK8 337 aa13.24□□□□□ -0.29
LINC01550-206ENST00000556462 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
LINC01550-206ENST00000556462 ATP5JP18859 108 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 DDR1Q08345 913 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 CNBD1Q8NA66 436 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 AKAP2Q9Y2D5 859 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 ZNF609O15014 1411 aa13.23□□□□□ -0.29
LINC01550-206ENST00000556462 LRP5O75197 1615 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 PDE8BO95263 885 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
LINC01550-206ENST00000556462 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
LINC01550-206ENST00000556462 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms