RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TRIM11Q96F44 468 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 PPP1R12CQ9BZL4 782 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 ERICH3Q5RHP9 1530 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 EPB42P16452 691 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 TBCELQ5QJ74 424 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-241ENST00000556374 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 BTLAQ7Z6A9 289 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 CALR3Q96L12 384 aaKnown RBP6.62□□□□□ -1.35
ATXN3-241ENST00000556374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-241ENST00000556374 HCN4Q9Y3Q4 1203 aa6.62□□□□□ -1.35
ATXN3-241ENST00000556374 GOLGA3Q08378 1498 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 TEX14Q8IWB6 1497 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 SFI1A8K8P3 1242 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 TGFBR3LH3BV60 316 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 C20orf204Q6ZNR8 217 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-241ENST00000556374 SLC30A3Q99726 388 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 VRTNQ9H8Y1 702 aa6.61□□□□□ -1.35
ATXN3-241ENST00000556374 WRNQ14191 1432 aaPredicted RBP eCLIP6.6□□□□□ -1.35
ATXN3-241ENST00000556374 CEP162Q5TB80 1403 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 M0R082 166 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 FOXO3O43524 673 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ADH7P40394 386 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 GATA4P43694 442 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ZNF417Q8TAU3 575 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 SCG3Q8WXD2 468 aaKnown RBP6.6□□□□□ -1.35
ATXN3-241ENST00000556374 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ZNF587Q96SQ5 575 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ADAMTSL3P82987 1691 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
ATXN3-241ENST00000556374 APBA3O96018 575 aa6.59□□□□□ -1.35
ATXN3-241ENST00000556374 NID1P14543 1247 aa6.59□□□□□ -1.35
ATXN3-241ENST00000556374 CHRNA4P43681 627 aa6.59□□□□□ -1.35
ATXN3-241ENST00000556374 STARD13Q9Y3M8 1113 aa6.59□□□□□ -1.35
ATXN3-241ENST00000556374 KIAA0586Q9BVV6 1533 aa6.59□□□□□ -1.35
ATXN3-241ENST00000556374 PLB1Q6P1J6 1458 aa6.59□□□□□ -1.36
ATXN3-241ENST00000556374 ASXL2Q76L83 1435 aa6.59□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L15C9J2P7 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L10C9JJH3 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L13C9JLJ4 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L12C9JPN9 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L11C9JVI0 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L21D6R901 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L18D6R9N7 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L22D6RA61 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L17D6RBQ6 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L19D6RCP7 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L20D6RJB6 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 LILRB5O75023 590 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 USP17L24Q0WX57 530 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 TRIM28Q13263 835 aaKnown RBP6.58□□□□□ -1.36
ATXN3-241ENST00000556374 ZNF280CQ8ND82 737 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-241ENST00000556374 MYO19Q96H55 970 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 HSH2DQ96JZ2 352 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 DMGDHQ9UI17 866 aaKnown RBP6.58□□□□□ -1.36
ATXN3-241ENST00000556374 PTPRMP28827 1452 aa6.58□□□□□ -1.36
ATXN3-241ENST00000556374 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-241ENST00000556374 C9orf172C9J069 976 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 WEE1P30291 646 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 DPYDQ12882 1025 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 CCINQ13939 588 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 CRTC2Q53ET0 693 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-241ENST00000556374 GSX2Q9BZM3 304 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 FRRS1LQ9P0K9 344 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 MADDQ8WXG6 1647 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
ATXN3-241ENST00000556374 EPRSP07814 1512 aaKnown RBP6.56□□□□□ -1.36
ATXN3-241ENST00000556374 ALBP02768 609 aa6.56□□□□□ -1.36
ATXN3-241ENST00000556374 DTWD1Q8N5C7 304 aa6.56□□□□□ -1.36
ATXN3-241ENST00000556374 TTC9Q92623 222 aa6.56□□□□□ -1.36
ATXN3-241ENST00000556374 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
ATXN3-241ENST00000556374 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
ATXN3-241ENST00000556374 ELNP15502 786 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 ARID4AP29374 1257 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-241ENST00000556374 NRG1Q02297 640 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-241ENST00000556374 SWI5Q1ZZU3 235 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 BHMTQ93088 406 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 ARXQ96QS3 562 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-241ENST00000556374 BCORL1Q5H9F3 1711 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 CFAP43Q8NDM7 1665 aa6.55□□□□□ -1.36
ATXN3-241ENST00000556374 ZCCHC11Q5TAX3 1644 aaKnown RBP6.54□□□□□ -1.36
ATXN3-241ENST00000556374 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 EGFRP00533 1210 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 LMOD1P29536 600 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-241ENST00000556374 INPP5BP32019 993 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 ARSDP51689 593 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 ELOAQ14241 798 aaKnown RBP6.54□□□□□ -1.36
ATXN3-241ENST00000556374 C11orf91Q3C1V1 193 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 PNMA5Q96PV4 448 aa6.54□□□□□ -1.36
ATXN3-241ENST00000556374 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
ATXN3-241ENST00000556374 SLC6A14Q9UN76 642 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms