RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TARSP26639 723 aaKnown RBP10.29□□□□□ -0.76
PRPF39-209ENST00000556353 ETFBKMTQ8IXQ9 262 aa10.29□□□□□ -0.76
PRPF39-209ENST00000556353 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
PRPF39-209ENST00000556353 ZFATQ9P243 1243 aa10.29□□□□□ -0.76
PRPF39-209ENST00000556353 PROCP04070 461 aa10.28□□□□□ -0.76
PRPF39-209ENST00000556353 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
PRPF39-209ENST00000556353 PRRT3Q5FWE3 981 aa10.28□□□□□ -0.76
PRPF39-209ENST00000556353 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
PRPF39-209ENST00000556353 XYLBO75191 536 aa10.27□□□□□ -0.77
PRPF39-209ENST00000556353 EGFRP00533 1210 aa10.27□□□□□ -0.77
PRPF39-209ENST00000556353 NID1P14543 1247 aa10.27□□□□□ -0.77
PRPF39-209ENST00000556353 ARID4AP29374 1257 aaPredicted RBP10.27□□□□□ -0.77
PRPF39-209ENST00000556353 PSAPL1Q6NUJ1 521 aa10.27□□□□□ -0.77
PRPF39-209ENST00000556353 DHX32Q7L7V1 743 aaKnown RBP10.27□□□□□ -0.77
PRPF39-209ENST00000556353 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
PRPF39-209ENST00000556353 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
PRPF39-209ENST00000556353 C1QTNF9BB2RNN3 333 aa10.26□□□□□ -0.77
PRPF39-209ENST00000556353 TNFRSF10BO14763 440 aa10.26□□□□□ -0.77
PRPF39-209ENST00000556353 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
PRPF39-209ENST00000556353 NAGPAQ9UK23 515 aa10.26□□□□□ -0.77
PRPF39-209ENST00000556353 RGS9O75916 674 aaPredicted RBP10.25□□□□□ -0.77
PRPF39-209ENST00000556353 CD163Q86VB7 1156 aa10.25□□□□□ -0.77
PRPF39-209ENST00000556353 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
PRPF39-209ENST00000556353 CPB1P15086 417 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 CHRNA4P43681 627 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 GPLD1P80108 840 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 TRIM28Q13263 835 aaKnown RBP10.24□□□□□ -0.77
PRPF39-209ENST00000556353 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 TRPM4Q8TD43 1214 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 STIM2Q9P246 746 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 KCNMB2Q9Y691 235 aa10.24□□□□□ -0.77
PRPF39-209ENST00000556353 ABTB2Q8N961 1025 aa10.23□□□□□ -0.77
PRPF39-209ENST00000556353 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
PRPF39-209ENST00000556353 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
PRPF39-209ENST00000556353 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
PRPF39-209ENST00000556353 ZAP70P43403 619 aa10.22□□□□□ -0.77
PRPF39-209ENST00000556353 AFF1P51825 1210 aaKnown RBP10.22□□□□□ -0.77
PRPF39-209ENST00000556353 NRLP54845 237 aa10.22□□□□□ -0.77
PRPF39-209ENST00000556353 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-209ENST00000556353 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
PRPF39-209ENST00000556353 ZBTB42B2RXF5 422 aa10.21□□□□□ -0.77
PRPF39-209ENST00000556353 APBA3O96018 575 aa10.21□□□□□ -0.77
PRPF39-209ENST00000556353 PSAPP07602 524 aa10.21□□□□□ -0.77
PRPF39-209ENST00000556353 SUZ12Q15022 739 aaKnown RBP10.21□□□□□ -0.77
PRPF39-209ENST00000556353 ELMSAN1Q6PJG2 1045 aa10.21□□□□□ -0.77
PRPF39-209ENST00000556353 FRRS1LQ9P0K9 344 aa10.21□□□□□ -0.77
PRPF39-209ENST00000556353 BAG6P46379 1132 aa10.2□□□□□ -0.78
PRPF39-209ENST00000556353 PLAURQ03405 335 aa10.2□□□□□ -0.78
PRPF39-209ENST00000556353 PERM1Q5SV97 790 aa10.2□□□□□ -0.78
PRPF39-209ENST00000556353 LPIN3Q9BQK8 851 aa10.2□□□□□ -0.78
PRPF39-209ENST00000556353 TMEM88BA6NKF7 163 aa10.19□□□□□ -0.78
PRPF39-209ENST00000556353 MMP20O60882 483 aa10.19□□□□□ -0.78
PRPF39-209ENST00000556353 TRIP4Q15650 581 aaPredicted RBP10.19□□□□□ -0.78
PRPF39-209ENST00000556353 ERICH6Q7L0X2 663 aa10.19□□□□□ -0.78
PRPF39-209ENST00000556353 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
PRPF39-209ENST00000556353 FNDC3AQ9Y2H6 1198 aaKnown RBP10.19□□□□□ -0.78
PRPF39-209ENST00000556353 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 ZBTB39O15060 712 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
PRPF39-209ENST00000556353 RAC1P63000 192 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 GPR152Q8TDT2 470 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 NACC1Q96RE7 527 aa10.18□□□□□ -0.78
PRPF39-209ENST00000556353 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
PRPF39-209ENST00000556353 SOX18P35713 384 aa10.17□□□□□ -0.78
PRPF39-209ENST00000556353 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
PRPF39-209ENST00000556353 SSFA2P28290 1259 aa10.16□□□□□ -0.78
PRPF39-209ENST00000556353 GATA4P43694 442 aa10.16□□□□□ -0.78
PRPF39-209ENST00000556353 DMRTC2Q8IXT2 367 aaPredicted RBP10.16□□□□□ -0.78
PRPF39-209ENST00000556353 TTC9Q92623 222 aa10.16□□□□□ -0.78
PRPF39-209ENST00000556353 NSUN5Q96P11 429 aaKnown RBP10.16□□□□□ -0.78
PRPF39-209ENST00000556353 SMG9Q9H0W8 520 aaKnown RBP10.16□□□□□ -0.78
PRPF39-209ENST00000556353 LOC102724428A0A0B4J2F2 783 aa10.15□□□□□ -0.78
PRPF39-209ENST00000556353 HOXD8P13378 290 aaPredicted RBP10.15□□□□□ -0.78
PRPF39-209ENST00000556353 ELNP15502 786 aa10.15□□□□□ -0.78
PRPF39-209ENST00000556353 SIK1P57059 783 aa10.15□□□□□ -0.78
PRPF39-209ENST00000556353 GRIK4Q16099 956 aa10.15□□□□□ -0.78
PRPF39-209ENST00000556353 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
PRPF39-209ENST00000556353 J3QW42 95 aa10.14□□□□□ -0.79
PRPF39-209ENST00000556353 GHRHP01286 108 aa10.14□□□□□ -0.79
PRPF39-209ENST00000556353 SCNN1AP37088 669 aa10.14□□□□□ -0.79
PRPF39-209ENST00000556353 RBSNQ9H1K0 784 aa10.14□□□□□ -0.79
PRPF39-209ENST00000556353 ADAM23O75077 832 aa10.13□□□□□ -0.79
PRPF39-209ENST00000556353 GRIK5Q16478 980 aa10.13□□□□□ -0.79
PRPF39-209ENST00000556353 WFDC8Q8IUA0 241 aa10.13□□□□□ -0.79
PRPF39-209ENST00000556353 PLD4Q96BZ4 506 aa10.13□□□□□ -0.79
PRPF39-209ENST00000556353 C9orf172C9J069 976 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 FURINP09958 794 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 TTC39BQ5VTQ0 682 aaPredicted RBP10.12□□□□□ -0.79
PRPF39-209ENST00000556353 ATCAYQ86WG3 371 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 FMR1NBQ8N0W7 255 aaPredicted RBP10.12□□□□□ -0.79
PRPF39-209ENST00000556353 DTWD1Q8N5C7 304 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 GTF3C2Q8WUA4 911 aaPredicted RBP10.12□□□□□ -0.79
PRPF39-209ENST00000556353 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
PRPF39-209ENST00000556353 K7ELQ4 463 aaPredicted RBP10.11□□□□□ -0.79
PRPF39-209ENST00000556353 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
PRPF39-209ENST00000556353 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
PRPF39-209ENST00000556353 NUDT16Q96DE0 195 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms