RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-236ENST00000556220 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 TTC24A2A3L6 582 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-236ENST00000556220 SIK1P57059 783 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 USHBP1Q8N6Y0 703 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 L3MBTL2Q969R5 705 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
ATXN3-236ENST00000556220 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
ATXN3-236ENST00000556220 WDR90Q96KV7 1748 aa9.71□□□□□ -0.85
ATXN3-236ENST00000556220 CYP27B1O15528 508 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 JUNDP17535 347 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 KCNA3P22001 575 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 TMF1P82094 1093 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-236ENST00000556220 CTC1Q2NKJ3 1217 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 CCDC24Q8N4L8 307 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
ATXN3-236ENST00000556220 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-236ENST00000556220 COG3Q96JB2 828 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
ATXN3-236ENST00000556220 DOT1LQ8TEK3 1739 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 FDX1P10109 184 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 SYMPKQ92797 1274 aaKnown RBP9.7□□□□□ -0.86
ATXN3-236ENST00000556220 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 ROCK2O75116 1388 aaKnown RBP9.7□□□□□ -0.86
ATXN3-236ENST00000556220 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
ATXN3-236ENST00000556220 POTECB2RU33 542 aa9.69□□□□□ -0.86
ATXN3-236ENST00000556220 ITPK1Q13572 414 aa9.69□□□□□ -0.86
ATXN3-236ENST00000556220 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
ATXN3-236ENST00000556220 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
ATXN3-236ENST00000556220 PIM2Q9P1W9 311 aa9.69□□□□□ -0.86
ATXN3-236ENST00000556220 LTN1O94822 1766 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 C5P01031 1676 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 KCPQ6ZWJ8 1503 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 A0A1W2PP64 1363 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 AXIN1O15169 862 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-236ENST00000556220 WNT7BP56706 349 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
ATXN3-236ENST00000556220 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
ATXN3-236ENST00000556220 PCDHGC3Q9UN70 934 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
ATXN3-236ENST00000556220 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
ATXN3-236ENST00000556220 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
ATXN3-236ENST00000556220 GIGYF2Q6Y7W6 1299 aaKnown RBP9.67□□□□□ -0.86
ATXN3-236ENST00000556220 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
ATXN3-236ENST00000556220 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
ATXN3-236ENST00000556220 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
ATXN3-236ENST00000556220 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
ATXN3-236ENST00000556220 GYS1P13807 737 aa9.66□□□□□ -0.86
ATXN3-236ENST00000556220 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-236ENST00000556220 SMPD1P17405 629 aa9.66□□□□□ -0.86
ATXN3-236ENST00000556220 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
ATXN3-236ENST00000556220 FAM208AQ9UK61 1670 aaKnown RBP9.66□□□□□ -0.86
ATXN3-236ENST00000556220 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 GLTPD2A6NH11 291 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 RC3H1Q5TC82 1133 aaKnown RBP9.65□□□□□ -0.86
ATXN3-236ENST00000556220 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 TAF1LQ8IZX4 1826 aa9.65□□□□□ -0.86
ATXN3-236ENST00000556220 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
ATXN3-236ENST00000556220 UBR3Q6ZT12 1888 aa9.64□□□□□ -0.87
ATXN3-236ENST00000556220 ZC3H4Q9UPT8 1303 aaKnown RBP9.64□□□□□ -0.87
ATXN3-236ENST00000556220 MOXD2PA6NHM9 499 aa9.64□□□□□ -0.87
ATXN3-236ENST00000556220 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
ATXN3-236ENST00000556220 RFC4P35249 363 aa9.64□□□□□ -0.87
ATXN3-236ENST00000556220 SKOR1P84550 965 aa9.64□□□□□ -0.87
ATXN3-236ENST00000556220 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
ATXN3-236ENST00000556220 FOXN1O15353 648 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 MS4A1P11836 297 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 NDUFV2P19404 249 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 GJA5P36382 358 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 INSRP06213 1382 aa9.63□□□□□ -0.87
ATXN3-236ENST00000556220 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 FYB1O15117 783 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 RPS6KA4O75676 772 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 LMNB1P20700 586 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 CHRNA5P30532 468 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 PTPRNQ16849 979 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 CARD11Q9BXL7 1154 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms