RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 FER1L6Q2WGJ9 1857 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 NUP98P52948 1817 aa8.82□□□□□ -1
PSEN1-216ENST00000556066 DICER1Q9UPY3 1922 aaKnown RBP8.82□□□□□ -1
PSEN1-216ENST00000556066 RALBP1Q15311 655 aa8.82□□□□□ -1
PSEN1-216ENST00000556066 PNISRQ8TF01 805 aaKnown RBP8.82□□□□□ -1
PSEN1-216ENST00000556066 PDZRN3Q9UPQ7 1066 aa8.82□□□□□ -1
PSEN1-216ENST00000556066 NIP7Q9Y221 180 aaKnown RBP eCLIP8.82□□□□□ -1
PSEN1-216ENST00000556066 RRP7AQ9Y3A4 280 aaKnown RBP8.82□□□□□ -1
PSEN1-216ENST00000556066 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
PSEN1-216ENST00000556066 NFKBIEO00221 500 aa8.81□□□□□ -1
PSEN1-216ENST00000556066 MYL6BP14649 208 aa8.81□□□□□ -1
PSEN1-216ENST00000556066 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
PSEN1-216ENST00000556066 CLEC4GQ6UXB4 293 aa8.81□□□□□ -1
PSEN1-216ENST00000556066 TNS4Q8IZW8 715 aa8.81□□□□□ -1
PSEN1-216ENST00000556066 SRGNP10124 158 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 RIPK4P57078 832 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 EIF4A1P60842 406 aaKnown RBP8.8□□□□□ -1
PSEN1-216ENST00000556066 HLFQ16534 295 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 STYK1Q6J9G0 422 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 PRPF40BQ6NWY9 871 aaKnown RBP8.8□□□□□ -1
PSEN1-216ENST00000556066 TPTE2Q6XPS3 522 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 CNKSR1Q969H4 720 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 MASTLQ96GX5 879 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 WDR90Q96KV7 1748 aa8.8□□□□□ -1
PSEN1-216ENST00000556066 NEUROD2Q15784 382 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 ERFEQ4G0M1 354 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 KIF6Q6ZMV9 814 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 ANKRD13DQ6ZTN6 518 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 CCDC146Q8IYE0 955 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 TAOK3Q9H2K8 898 aa8.79□□□□□ -1
PSEN1-216ENST00000556066 MYBBP1AQ9BQG0 1328 aaKnown RBP8.79□□□□□ -1
PSEN1-216ENST00000556066 ZC3H4Q9UPT8 1303 aaKnown RBP8.79□□□□□ -1
PSEN1-216ENST00000556066 GLTPD2A6NH11 291 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 VEGFAP15692 232 aaPredicted RBP8.78□□□□□ -1
PSEN1-216ENST00000556066 NPR1P16066 1061 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 EIF2S2P20042 333 aaKnown RBP8.78□□□□□ -1
PSEN1-216ENST00000556066 GPTP24298 496 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
PSEN1-216ENST00000556066 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
PSEN1-216ENST00000556066 TMPOP42166 694 aaKnown RBP8.77□□□□□ -1.01
PSEN1-216ENST00000556066 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 SOGA3Q5TF21 947 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 SMC1BQ8NDV3 1235 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 NYXQ9GZU5 481 aa8.77□□□□□ -1.01
PSEN1-216ENST00000556066 LAS1LQ9Y4W2 734 aaKnown RBP8.77□□□□□ -1.01
PSEN1-216ENST00000556066 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
PSEN1-216ENST00000556066 HSPA1AP0DMV8 641 aaKnown RBP8.76□□□□□ -1.01
PSEN1-216ENST00000556066 HSPA1BP0DMV9 641 aaKnown RBP8.76□□□□□ -1.01
PSEN1-216ENST00000556066 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
PSEN1-216ENST00000556066 OLFM4Q6UX06 510 aa8.76□□□□□ -1.01
PSEN1-216ENST00000556066 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
PSEN1-216ENST00000556066 ABCC12Q96J65 1359 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 KLRG2A4D1S0 409 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-216ENST00000556066 POTECB2RU33 542 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 ANXA1P04083 346 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 ALDH1B1P30837 517 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 RPGRQ92834 1020 aaKnown RBP8.75□□□□□ -1.01
PSEN1-216ENST00000556066 RUNDC1Q96C34 613 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 ZNF277Q9NRM2 450 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-216ENST00000556066 ANKRD36CQ5JPF3 1778 aa8.75□□□□□ -1.01
PSEN1-216ENST00000556066 DDNO94850 711 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-216ENST00000556066 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
PSEN1-216ENST00000556066 PROSER3Q2NL68 480 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 SUSD4Q5VX71 490 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 GPR153Q6NV75 609 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
PSEN1-216ENST00000556066 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 UBN2Q6ZU65 1347 aa8.74□□□□□ -1.01
PSEN1-216ENST00000556066 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
PSEN1-216ENST00000556066 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSEN1-216ENST00000556066 PDIA6Q15084 440 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 KRT24Q2M2I5 525 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 ZNF34Q8IZ26 560 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 RTKN2Q8IZC4 609 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 BABAM1Q9NWV8 329 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 SCN4AP35499 1836 aa8.73□□□□□ -1.01
PSEN1-216ENST00000556066 LAMB2P55268 1798 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 CHL1O00533 1208 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 NTSR2O95665 410 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 CRY2Q49AN0 593 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 PARP10Q53GL7 1025 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 COPS6Q7L5N1 327 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 SYNE4Q8N205 404 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 XAGE3Q8WTP9 111 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
PSEN1-216ENST00000556066 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-216ENST00000556066 TAF1P21675 1872 aa8.72□□□□□ -1.01
PSEN1-216ENST00000556066 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.02
PSEN1-216ENST00000556066 ARSIQ5FYB1 569 aa8.71□□□□□ -1.02
PSEN1-216ENST00000556066 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms