RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KIF13BQ9NQT8 1826 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 MYH3P11055 1940 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 SRGNP10124 158 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 CASP7P55210 303 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.88
TDP1-214ENST00000556063 CRAMP1Q96RY5 1269 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 MEIS3Q99687 375 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 TMX4Q9H1E5 349 aaPredicted RBP9.56□□□□□ -0.88
TDP1-214ENST00000556063 PIM2Q9P1W9 311 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
TDP1-214ENST00000556063 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
TDP1-214ENST00000556063 DPEP1P16444 411 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 CHRNA5P30532 468 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
TDP1-214ENST00000556063 AAMPQ13685 434 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 C20orf194Q5TEA3 1177 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 TTLL11Q8NHH1 800 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 SUCLG2Q96I99 432 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 CDC5LQ99459 802 aaKnown RBP9.55□□□□□ -0.88
TDP1-214ENST00000556063 LRRFIP2Q9Y608 721 aaKnown RBP9.55□□□□□ -0.88
TDP1-214ENST00000556063 LAMB2P55268 1798 aa9.55□□□□□ -0.88
TDP1-214ENST00000556063 RTL9Q8NET4 1388 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 ANKRD18BA2A2Z9 1011 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 BBOX1O75936 387 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 NEFLP07196 543 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 CSF1RP07333 972 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 FOXO4P98177 505 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 IFIT5Q13325 482 aaKnown RBP9.54□□□□□ -0.88
TDP1-214ENST00000556063 CCDC57Q2TAC2 916 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 DALRD3Q5D0E6 543 aaKnown RBP9.54□□□□□ -0.88
TDP1-214ENST00000556063 TAF7LQ5H9L4 462 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
TDP1-214ENST00000556063 BICC1Q9H694 974 aaKnown RBP9.54□□□□□ -0.88
TDP1-214ENST00000556063 DDX60Q8IY21 1712 aaKnown RBP9.53□□□□□ -0.88
TDP1-214ENST00000556063 IGHMBP2P38935 993 aaKnown RBP9.53□□□□□ -0.88
TDP1-214ENST00000556063 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
TDP1-214ENST00000556063 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
TDP1-214ENST00000556063 ANKRD18AQ8IVF6 992 aa9.53□□□□□ -0.88
TDP1-214ENST00000556063 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
TDP1-214ENST00000556063 HMMRO75330 724 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 ITGA6P23229 1130 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 DSG3P32926 999 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 GRAPQ13588 217 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 EPHA10Q5JZY3 1008 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 SOGA3Q5TF21 947 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 C3orf67Q6ZVT6 689 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.89
TDP1-214ENST00000556063 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.89
TDP1-214ENST00000556063 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 CRBNQ96SW2 442 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 MPHOSPH8Q99549 860 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 GREM2Q9H772 168 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 ZBTB40Q9NUA8 1239 aa9.52□□□□□ -0.89
TDP1-214ENST00000556063 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
TDP1-214ENST00000556063 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
TDP1-214ENST00000556063 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 KCNA3P22001 575 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 ATP8B2P98198 1209 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 MTX1Q13505 466 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
TDP1-214ENST00000556063 ANKRD44Q8N8A2 993 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
TDP1-214ENST00000556063 GPR162Q16538 588 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
TDP1-214ENST00000556063 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 CNNM1Q9NRU3 951 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 BSDC1Q9NW68 430 aaPredicted RBP9.5□□□□□ -0.89
TDP1-214ENST00000556063 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
TDP1-214ENST00000556063 COL11A2P13942 1736 aaPredicted RBP9.5□□□□□ -0.89
TDP1-214ENST00000556063 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 CEP85Q6P2H3 762 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 LDHAL6AQ6ZMR3 332 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 RTKN2Q8IZC4 609 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 CELF1Q92879 486 aaKnown RBP9.49□□□□□ -0.89
TDP1-214ENST00000556063 ANKRD2Q9GZV1 360 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 SLX4Q8IY92 1834 aa9.49□□□□□ -0.89
TDP1-214ENST00000556063 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
TDP1-214ENST00000556063 KIAA1551Q9HCM1 1747 aa9.48□□□□□ -0.89
TDP1-214ENST00000556063 C21orf2O43822 256 aa9.48□□□□□ -0.89
TDP1-214ENST00000556063 G3BP1Q13283 466 aaKnown RBP eCLIP9.48□□□□□ -0.89
TDP1-214ENST00000556063 OS9Q13438 667 aaPredicted RBP9.48□□□□□ -0.89
TDP1-214ENST00000556063 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
TDP1-214ENST00000556063 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
TDP1-214ENST00000556063 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
TDP1-214ENST00000556063 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
TDP1-214ENST00000556063 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms