RNA–Protein interactions for RNA: ENST00000556027.5

DDHD1-207, Transcript of DDHD domain containing 1, humanhuman

TSL 1 (best)

Gene DDHD1, Length 3,951 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDHD1-207ENST00000556027 RC3H1Q5TC82 1133 aaKnown RBP3.83□□□□□ -1.8
DDHD1-207ENST00000556027 LSM14AQ8ND56 463 aaKnown RBP3.83□□□□□ -1.8
DDHD1-207ENST00000556027 RASSF4Q9H2L5 321 aa3.83□□□□□ -1.8
DDHD1-207ENST00000556027 POLA1P09884 1462 aaPredicted RBP3.83□□□□□ -1.8
DDHD1-207ENST00000556027 SNAPC4Q5SXM2 1469 aa3.83□□□□□ -1.8
DDHD1-207ENST00000556027 RPRD2Q5VT52 1461 aaKnown RBP3.83□□□□□ -1.8
DDHD1-207ENST00000556027 PLEKHH2Q8IVE3 1493 aa3.83□□□□□ -1.8
DDHD1-207ENST00000556027 ITSN2Q9NZM3 1697 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 H7C1W4 665 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 MYBL2P10244 700 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SRPK2P78362 688 aaKnown RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SF3B2Q13435 895 aaKnown RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 KCTD2Q14681 263 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 VPS72Q15906 364 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 TTC19Q6DKK2 380 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 FBXO38Q6PIJ6 1188 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 TEX19Q8NA77 164 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SMARCE1Q969G3 411 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 MIEF2Q96C03 454 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 FAM210AQ96ND0 272 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SUN2Q9UH99 717 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 NRBP1Q9UHY1 535 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SASH3O75995 380 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 FCHSD2O94868 740 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 PKP1Q13835 747 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 AMOTQ4VCS5 1084 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 EAPPQ56P03 285 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 C9orf131Q5VYM1 1079 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CDCA2Q69YH5 1023 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 ZNF746Q6NUN9 644 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 NCAPG2Q86XI2 1143 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SAMD3Q8N6K7 520 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 IL17RAQ96F46 866 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 FUCA2Q9BTY2 467 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 QTRT2Q9H974 415 aaKnown RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CWC25Q9NXE8 425 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 PDZRN3Q9UPQ7 1066 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 HECW2Q9P2P5 1572 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 MYO5CQ9NQX4 1742 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 KDRP35968 1356 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 MSH6P52701 1360 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SOS1Q07889 1333 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CTAGE5O15320 804 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 RPS6KA5O75582 802 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 TRAPPC10P48553 1259 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CLK2P49760 499 aaKnown RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CCNHP51946 323 aaPredicted RBP3.82□□□□□ -1.8
DDHD1-207ENST00000556027 ARMC3Q5W041 872 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 ATL2Q8NHH9 583 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 SLC35B4Q969S0 331 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 AGAP3Q96P47 875 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 CHMP5Q9NZZ3 219 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 ABCC3O15438 1527 aa3.82□□□□□ -1.8
DDHD1-207ENST00000556027 COL6A1P12109 1028 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 ARID5AQ03989 594 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TRDNQ13061 729 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 HDGFL2Q7Z4V5 671 aaPredicted RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 WDR75Q8IWA0 830 aaKnown RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 VPS37AQ8NEZ2 397 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TGIF2Q9GZN2 237 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TOMM22Q9NS69 142 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 BLOC1S6Q9UL45 172 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 AKAP2Q9Y2D5 859 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 CTDP1Q9Y5B0 961 aaPredicted RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TCOF1Q13428 1488 aaKnown RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 ABCC10Q5T3U5 1492 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 CCDC66A2RUB6 948 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 ERICH4A6NGS2 130 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 C19orf67A6NJJ6 358 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 DDX11L8A8MPP1 907 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 NAT1P18440 290 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 NUBP1P53384 320 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 ADCY2Q08462 1091 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 PKN1Q16512 942 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 DUSP27Q5VZP5 1158 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 NAIF1Q69YI7 327 aaPredicted RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TLDC1Q6P9B6 456 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 FERMT3Q86UX7 667 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 NEK11Q8NG66 645 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 CHAMP1Q96JM3 812 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 YIPF2Q9BWQ6 316 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 PIF1Q9H611 641 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 PICK1Q9NRD5 415 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 MCM8Q9UJA3 840 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 FBXO2Q9UK22 296 aaPredicted RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 ABCC11Q96J66 1382 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 PTPRGP23470 1445 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 SOCS7O14512 581 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 INHBCP55103 352 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 RASA3Q14644 834 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 NLGN1Q8N2Q7 840 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 FAM184AQ8NB25 1140 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 TMEM87AQ8NBN3 555 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 BRD4O60885 1362 aaPredicted RBP3.81□□□□□ -1.8
DDHD1-207ENST00000556027 MAGI3Q5TCQ9 1506 aa3.81□□□□□ -1.8
DDHD1-207ENST00000556027 PABPN1LA6NDY0 278 aaKnown RBP3.8□□□□□ -1.8
DDHD1-207ENST00000556027 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
DDHD1-207ENST00000556027 ZSCAN9O15535 394 aaPredicted RBP3.8□□□□□ -1.8
DDHD1-207ENST00000556027 PDGFRBP09619 1106 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms