RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 GFRA3O60609 400 aa11.56□□□□□ -0.56
PSEN1-215ENST00000556011 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
PSEN1-215ENST00000556011 OLFM4Q6UX06 510 aa11.56□□□□□ -0.56
PSEN1-215ENST00000556011 C7orf43Q8WVR3 580 aa11.56□□□□□ -0.56
PSEN1-215ENST00000556011 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-215ENST00000556011 BMP1P13497 986 aa11.55□□□□□ -0.56
PSEN1-215ENST00000556011 GJA8P48165 433 aa11.55□□□□□ -0.56
PSEN1-215ENST00000556011 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
PSEN1-215ENST00000556011 KCNH6Q9H252 994 aa11.55□□□□□ -0.56
PSEN1-215ENST00000556011 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 ADM5C9JUS6 153 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 RGL3Q3MIN7 710 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 FAM208AQ9UK61 1670 aaKnown RBP11.54□□□□□ -0.56
PSEN1-215ENST00000556011 TJP1Q07157 1748 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 DMXL1Q9Y485 3027 aa11.54□□□□□ -0.56
PSEN1-215ENST00000556011 ID4P47928 161 aa11.53□□□□□ -0.56
PSEN1-215ENST00000556011 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
PSEN1-215ENST00000556011 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
PSEN1-215ENST00000556011 RGPD2P0DJD1 1756 aa11.53□□□□□ -0.56
PSEN1-215ENST00000556011 DMDP11532 3685 aa11.53□□□□□ -0.56
PSEN1-215ENST00000556011 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.56
PSEN1-215ENST00000556011 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
PSEN1-215ENST00000556011 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.57
PSEN1-215ENST00000556011 PDE6BP35913 854 aa11.51□□□□□ -0.57
PSEN1-215ENST00000556011 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
PSEN1-215ENST00000556011 ST3GAL2Q16842 350 aa11.51□□□□□ -0.57
PSEN1-215ENST00000556011 LTV1Q96GA3 475 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-215ENST00000556011 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
PSEN1-215ENST00000556011 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
PSEN1-215ENST00000556011 GJB1P08034 283 aa11.49□□□□□ -0.57
PSEN1-215ENST00000556011 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
PSEN1-215ENST00000556011 GMPSP49915 693 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-215ENST00000556011 STYK1Q6J9G0 422 aa11.48□□□□□ -0.57
PSEN1-215ENST00000556011 BRIP1Q9BX63 1249 aa11.48□□□□□ -0.57
PSEN1-215ENST00000556011 KDRP35968 1356 aa11.48□□□□□ -0.57
PSEN1-215ENST00000556011 ZNF462Q96JM2 2506 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 PI4K2BG5E9Z4 385 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 ZPR1O75312 459 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 SP3Q02447 781 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 MOB2Q70IA6 237 aa11.47□□□□□ -0.57
PSEN1-215ENST00000556011 COL15A1P39059 1388 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 MYO9BQ13459 2157 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-215ENST00000556011 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 ATG3Q9NT62 314 aa11.46□□□□□ -0.57
PSEN1-215ENST00000556011 TRIOO75962 3097 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 ZNF831Q5JPB2 1677 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 SRGNP10124 158 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 CCL5P13501 91 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 KCNQ1P51787 676 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-215ENST00000556011 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
PSEN1-215ENST00000556011 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
PSEN1-215ENST00000556011 ZSWIM8A7E2V4 1837 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
PSEN1-215ENST00000556011 UBE2Q2LH0YL09 131 aa11.43□□□□□ -0.58
PSEN1-215ENST00000556011 CYP27B1O15528 508 aa11.43□□□□□ -0.58
PSEN1-215ENST00000556011 RNF208Q9H0X6 261 aa11.43□□□□□ -0.58
PSEN1-215ENST00000556011 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 PCDH11XQ9BZA7 1347 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 PCDH11YQ9BZA8 1340 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 CRHR2Q13324 411 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 CCDC85BQ15834 202 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-215ENST00000556011 CDCA5Q96FF9 252 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 MASTLQ96GX5 879 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 PAWRQ96IZ0 340 aaKnown RBP11.42□□□□□ -0.58
PSEN1-215ENST00000556011 TMOD3Q9NYL9 352 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 VPS13AQ96RL7 3174 aa11.42□□□□□ -0.58
PSEN1-215ENST00000556011 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
PSEN1-215ENST00000556011 TFF2Q03403 129 aa11.41□□□□□ -0.58
PSEN1-215ENST00000556011 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
PSEN1-215ENST00000556011 SH2B1Q9NRF2 756 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-215ENST00000556011 GVINP1Q7Z2Y8 2422 aa11.41□□□□□ -0.58
PSEN1-215ENST00000556011 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
PSEN1-215ENST00000556011 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
PSEN1-215ENST00000556011 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
PSEN1-215ENST00000556011 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
PSEN1-215ENST00000556011 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
PSEN1-215ENST00000556011 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
PSEN1-215ENST00000556011 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
PSEN1-215ENST00000556011 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
PSEN1-215ENST00000556011 FKBP1BP68106 108 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 BCL2L13Q9BXK5 485 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 CXXC1Q9P0U4 656 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-215ENST00000556011 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
PSEN1-215ENST00000556011 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 SPTBN2O15020 2390 aa11.38□□□□□ -0.59
PSEN1-215ENST00000556011 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
PSEN1-215ENST00000556011 CACNA1HO95180 2353 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms