RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
EFCAB11-209ENST00000556005 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
EFCAB11-209ENST00000556005 LRRC24Q50LG9 513 aa12.19□□□□□ -0.46
EFCAB11-209ENST00000556005 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
EFCAB11-209ENST00000556005 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
EFCAB11-209ENST00000556005 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
EFCAB11-209ENST00000556005 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
EFCAB11-209ENST00000556005 HAUS7Q99871 368 aa12.18□□□□□ -0.46
EFCAB11-209ENST00000556005 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
EFCAB11-209ENST00000556005 USP21Q9UK80 565 aa12.18□□□□□ -0.46
EFCAB11-209ENST00000556005 KCNQ2O43526 872 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 TIMM10P62072 90 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 NMIQ13287 307 aaPredicted RBP12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 AK7Q96M32 723 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 PDE8AO60658 829 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 CTSWP56202 376 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 ITPK1Q13572 414 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
EFCAB11-209ENST00000556005 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 ITGA6P23229 1130 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 MCM4P33991 863 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
EFCAB11-209ENST00000556005 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 NUCB2P80303 420 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 PTH1RQ03431 593 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
EFCAB11-209ENST00000556005 A0A0D9SFI3 127 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 HSP90B1P14625 803 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 KCNJ4P48050 445 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 KCNB2Q92953 911 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 GREM2Q9H772 168 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 ZNF609O15014 1411 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 NUP98P52948 1817 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 GSE1Q14687 1217 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 ANKRD36CQ5JPF3 1778 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 PRPF40BQ6NWY9 871 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 SH3TC1Q8TE82 1336 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 PAG1Q9NWQ8 432 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
EFCAB11-209ENST00000556005 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 TM6SF1Q9BZW5 370 aa12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 RBM8AQ9Y5S9 174 aaKnown RBP12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
EFCAB11-209ENST00000556005 CUL4AQ13619 759 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 DDX46Q7L014 1031 aaKnown RBP12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 GOLIM4O00461 696 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 CASTP20810 708 aaKnown RBP12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 PTMSP20962 102 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 PSMA5P28066 241 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 HMG20BQ9P0W2 317 aa12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
EFCAB11-209ENST00000556005 RREB1Q92766 1687 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 TAF5LO75529 589 aa12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 ZNF589Q86UQ0 364 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-209ENST00000556005 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms