RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
ATXN3-234ENST00000555958 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
ATXN3-234ENST00000555958 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
ATXN3-234ENST00000555958 MTMR7Q9Y216 660 aa9.16□□□□□ -0.94
ATXN3-234ENST00000555958 M0R082 166 aa9.15□□□□□ -0.94
ATXN3-234ENST00000555958 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
ATXN3-234ENST00000555958 MICALL1Q8N3F8 863 aa9.15□□□□□ -0.94
ATXN3-234ENST00000555958 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
ATXN3-234ENST00000555958 ZNF417Q8TAU3 575 aa9.15□□□□□ -0.94
ATXN3-234ENST00000555958 ZNF587Q96SQ5 575 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-234ENST00000555958 SLC6A14Q9UN76 642 aa9.15□□□□□ -0.94
ATXN3-234ENST00000555958 NISCHQ9Y2I1 1504 aa9.15□□□□□ -0.95
ATXN3-234ENST00000555958 ALBP02768 609 aa9.14□□□□□ -0.95
ATXN3-234ENST00000555958 PCSK7Q16549 785 aa9.14□□□□□ -0.95
ATXN3-234ENST00000555958 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
ATXN3-234ENST00000555958 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
ATXN3-234ENST00000555958 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
ATXN3-234ENST00000555958 ZBTB42B2RXF5 422 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 COL8A1P27658 744 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 PDE4CQ08493 712 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
ATXN3-234ENST00000555958 C20orf204Q6ZNR8 217 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 ATCAYQ86WG3 371 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
ATXN3-234ENST00000555958 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
ATXN3-234ENST00000555958 FNDC3AQ9Y2H6 1198 aaKnown RBP9.13□□□□□ -0.95
ATXN3-234ENST00000555958 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-234ENST00000555958 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-234ENST00000555958 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-234ENST00000555958 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 NUDT8Q8WV74 236 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 TRIM11Q96F44 468 aa9.12□□□□□ -0.95
ATXN3-234ENST00000555958 MMP20O60882 483 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 LILRB5O75023 590 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 ABL1P00519 1130 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 CPB1P15086 417 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 PSAPL1Q6NUJ1 521 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
ATXN3-234ENST00000555958 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
ATXN3-234ENST00000555958 PSAPP07602 524 aa9.1□□□□□ -0.95
ATXN3-234ENST00000555958 MPSTP25325 297 aa9.1□□□□□ -0.95
ATXN3-234ENST00000555958 EIF1AXP47813 144 aaKnown RBP9.1□□□□□ -0.95
ATXN3-234ENST00000555958 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-234ENST00000555958 AAMPQ13685 434 aa9.1□□□□□ -0.95
ATXN3-234ENST00000555958 HFE2Q6ZVN8 426 aa9.1□□□□□ -0.95
ATXN3-234ENST00000555958 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
ATXN3-234ENST00000555958 ANO2Q9NQ90 1003 aa9.1□□□□□ -0.95
ATXN3-234ENST00000555958 RGS9O75916 674 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-234ENST00000555958 NRLP54845 237 aa9.09□□□□□ -0.95
ATXN3-234ENST00000555958 GPLD1P80108 840 aa9.09□□□□□ -0.95
ATXN3-234ENST00000555958 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
ATXN3-234ENST00000555958 COL9A3Q14050 684 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-234ENST00000555958 ALYREFQ86V81 257 aaKnown RBP9.09□□□□□ -0.95
ATXN3-234ENST00000555958 EDEM1Q92611 657 aa9.09□□□□□ -0.95
ATXN3-234ENST00000555958 JPH1Q9HDC5 661 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-234ENST00000555958 NAGPAQ9UK23 515 aa9.09□□□□□ -0.95
ATXN3-234ENST00000555958 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 J3QW42 95 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 FAM13AO94988 1023 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 SIK1P57059 783 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 PLAURQ03405 335 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
ATXN3-234ENST00000555958 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-234ENST00000555958 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 ELMSAN1Q6PJG2 1045 aa9.08□□□□□ -0.96
ATXN3-234ENST00000555958 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
ATXN3-234ENST00000555958 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
ATXN3-234ENST00000555958 PCSK2P16519 638 aa9.07□□□□□ -0.96
ATXN3-234ENST00000555958 NPR3P17342 541 aa9.07□□□□□ -0.96
ATXN3-234ENST00000555958 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
ATXN3-234ENST00000555958 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
ATXN3-234ENST00000555958 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 NID1P14543 1247 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-234ENST00000555958 ZNF211Q13398 564 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-234ENST00000555958 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 TRAPPC3LQ5T215 181 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 NSUN5Q96P11 429 aaKnown RBP9.06□□□□□ -0.96
ATXN3-234ENST00000555958 GGNBP2Q9H3C7 697 aa9.06□□□□□ -0.96
ATXN3-234ENST00000555958 PDGFAP04085 211 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 SOX18P35713 384 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
ATXN3-234ENST00000555958 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 LPIN3Q9BQK8 851 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 ELP3Q9H9T3 547 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 FRRS1LQ9P0K9 344 aa9.05□□□□□ -0.96
ATXN3-234ENST00000555958 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
ATXN3-234ENST00000555958 SERPINB4P48594 390 aa9.04□□□□□ -0.96
ATXN3-234ENST00000555958 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
ATXN3-234ENST00000555958 PDE12Q6L8Q7 609 aaKnown RBP9.04□□□□□ -0.96
ATXN3-234ENST00000555958 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
ATXN3-234ENST00000555958 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
ATXN3-234ENST00000555958 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
ATXN3-234ENST00000555958 ABI2Q9NYB9 513 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms