RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
GABRB3-209ENST00000555632 CHGBP05060 677 aa22.32■■□□□ 1.16
GABRB3-209ENST00000555632 ST18O60284 1047 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 NMIQ13287 307 aaPredicted RBP22.31■■□□□ 1.16
GABRB3-209ENST00000555632 ZNF34Q8IZ26 560 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 HSPA1LP34931 641 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 UPF3BQ9BZI7 483 aaKnown RBP22.31■■□□□ 1.16
GABRB3-209ENST00000555632 GREM2Q9H772 168 aa22.31■■□□□ 1.16
GABRB3-209ENST00000555632 A0A0D9SFI3 127 aa22.3■■□□□ 1.16
GABRB3-209ENST00000555632 IRS4O14654 1257 aaPredicted RBP22.3■■□□□ 1.16
GABRB3-209ENST00000555632 ANAPC15P60006 121 aa22.3■■□□□ 1.16
GABRB3-209ENST00000555632 RASEFQ8IZ41 740 aa22.3■■□□□ 1.16
GABRB3-209ENST00000555632 FAM177BA6PVY3 158 aa22.3■■□□□ 1.16
GABRB3-209ENST00000555632 CIAO1O76071 339 aa22.3■■□□□ 1.16
GABRB3-209ENST00000555632 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
GABRB3-209ENST00000555632 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
GABRB3-209ENST00000555632 A0A1B0GUL7 405 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 EPB41L2O43491 1005 aaKnown RBP22.28■■□□□ 1.16
GABRB3-209ENST00000555632 CTSWP56202 376 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
GABRB3-209ENST00000555632 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 SMIM5Q71RC9 77 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 LINC00116Q8NCU8 138 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 RUFY2Q8WXA3 655 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 IL17RAQ96F46 866 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 ZNF609O15014 1411 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 ITGA6P23229 1130 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 SUSD4Q5VX71 490 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
GABRB3-209ENST00000555632 GPR108Q9NPR9 543 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 SNX14Q9Y5W7 946 aa22.28■■□□□ 1.16
GABRB3-209ENST00000555632 RREB1Q92766 1687 aa22.27■■□□□ 1.16
GABRB3-209ENST00000555632 DDX46Q7L014 1031 aaKnown RBP22.27■■□□□ 1.15
GABRB3-209ENST00000555632 HAUS7Q99871 368 aa22.27■■□□□ 1.15
GABRB3-209ENST00000555632 TAF7LQ5H9L4 462 aa22.26■■□□□ 1.15
GABRB3-209ENST00000555632 MEX3CQ5U5Q3 659 aaKnown RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 NOL8Q76FK4 1167 aaKnown RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 ZNF589Q86UQ0 364 aaPredicted RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 CEP126Q9P2H0 1117 aa22.25■■□□□ 1.15
GABRB3-209ENST00000555632 COL5A3P25940 1745 aaPredicted RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 CICQ96RK0 1608 aaPredicted RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 HCLS1P14317 486 aaPredicted RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 ADORA1P30542 326 aa22.25■■□□□ 1.15
GABRB3-209ENST00000555632 ZGPATQ8N5A5 531 aaKnown RBP22.25■■□□□ 1.15
GABRB3-209ENST00000555632 MYH3P11055 1940 aa22.25■■□□□ 1.15
GABRB3-209ENST00000555632 PDE8AO60658 829 aa22.24■■□□□ 1.15
GABRB3-209ENST00000555632 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
GABRB3-209ENST00000555632 THSD7AQ9UPZ6 1657 aa22.24■■□□□ 1.15
GABRB3-209ENST00000555632 HIP1O00291 1037 aa22.24■■□□□ 1.15
GABRB3-209ENST00000555632 SLFNL1Q499Z3 407 aa22.24■■□□□ 1.15
GABRB3-209ENST00000555632 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
GABRB3-209ENST00000555632 LDHAL6AQ6ZMR3 332 aa22.23■■□□□ 1.15
GABRB3-209ENST00000555632 TMX3Q96JJ7 454 aa22.23■■□□□ 1.15
GABRB3-209ENST00000555632 GJD4Q96KN9 370 aaPredicted RBP22.23■■□□□ 1.15
GABRB3-209ENST00000555632 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
GABRB3-209ENST00000555632 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
GABRB3-209ENST00000555632 SEC62Q99442 399 aaKnown RBP22.22■■□□□ 1.15
GABRB3-209ENST00000555632 SNRKQ9NRH2 765 aa22.22■■□□□ 1.15
GABRB3-209ENST00000555632 AFF2P51816 1311 aa22.22■■□□□ 1.15
GABRB3-209ENST00000555632 MED23Q9ULK4 1368 aa22.22■■□□□ 1.15
GABRB3-209ENST00000555632 GOLIM4O00461 696 aa22.22■■□□□ 1.15
GABRB3-209ENST00000555632 CPA1P15085 419 aa22.22■■□□□ 1.15
GABRB3-209ENST00000555632 TNPO1Q92973 898 aaKnown RBP22.22■■□□□ 1.15
GABRB3-209ENST00000555632 CIZ1Q9ULV3 898 aaPredicted RBP22.22■■□□□ 1.15
GABRB3-209ENST00000555632 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
GABRB3-209ENST00000555632 ANKRD18BA2A2Z9 1011 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 RAB3GAP1Q15042 981 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 NECTIN1Q15223 517 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 ADCK5Q3MIX3 580 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 MAP4K1Q92918 833 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 FBXO3Q9UK99 471 aa22.21■■□□□ 1.15
GABRB3-209ENST00000555632 DEKP35659 375 aaKnown RBP22.21■■□□□ 1.15
GABRB3-209ENST00000555632 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
GABRB3-209ENST00000555632 COL9A3Q14050 684 aaPredicted RBP22.2■■□□□ 1.14
GABRB3-209ENST00000555632 CCDC129Q6ZRS4 1044 aa22.2■■□□□ 1.14
GABRB3-209ENST00000555632 UTP14AQ9BVJ6 771 aaKnown RBP22.2■■□□□ 1.14
GABRB3-209ENST00000555632 PAG1Q9NWQ8 432 aa22.2■■□□□ 1.14
GABRB3-209ENST00000555632 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
GABRB3-209ENST00000555632 BTAF1O14981 1849 aa22.2■■□□□ 1.14
GABRB3-209ENST00000555632 MCM4P33991 863 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 PKP1Q13835 747 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
GABRB3-209ENST00000555632 KBTBD3Q8NAB2 608 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 IFIT1P09914 478 aaKnown RBP22.19■■□□□ 1.14
GABRB3-209ENST00000555632 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 CNNM1Q9NRU3 951 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 TAF6LQ9Y6J9 622 aa22.19■■□□□ 1.14
GABRB3-209ENST00000555632 NTSR2O95665 410 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 SSFA2P28290 1259 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 SCARF1Q14162 830 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 LARP6Q9BRS8 491 aaKnown RBP22.18■■□□□ 1.14
GABRB3-209ENST00000555632 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 TTC14Q96N46 770 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 SEC31BQ9NQW1 1179 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 AKAP2Q9Y2D5 859 aa22.18■■□□□ 1.14
GABRB3-209ENST00000555632 TAF5LO75529 589 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms