RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ATP1A2P50993 1020 aa8.68□□□□□ -1.02
SNX6-204ENST00000555541 TMEM130Q8N3G9 435 aa8.68□□□□□ -1.02
SNX6-204ENST00000555541 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
SNX6-204ENST00000555541 PALM3A6NDB9 673 aaPredicted RBP8.67□□□□□ -1.02
SNX6-204ENST00000555541 TGFBR3LH3BV60 316 aa8.67□□□□□ -1.02
SNX6-204ENST00000555541 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
SNX6-204ENST00000555541 HIF1AQ16665 826 aa8.67□□□□□ -1.02
SNX6-204ENST00000555541 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
SNX6-204ENST00000555541 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
SNX6-204ENST00000555541 ATAD2Q6PL18 1390 aa8.66□□□□□ -1.02
SNX6-204ENST00000555541 YBX3P16989 372 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNX6-204ENST00000555541 INPP5BP32019 993 aa8.66□□□□□ -1.02
SNX6-204ENST00000555541 PCSK7Q16549 785 aa8.66□□□□□ -1.02
SNX6-204ENST00000555541 PNMA5Q96PV4 448 aa8.66□□□□□ -1.02
SNX6-204ENST00000555541 F8W735 103 aaPredicted RBP8.65□□□□□ -1.02
SNX6-204ENST00000555541 ALX3O95076 343 aa8.65□□□□□ -1.02
SNX6-204ENST00000555541 GPLD1P80108 840 aa8.65□□□□□ -1.02
SNX6-204ENST00000555541 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
SNX6-204ENST00000555541 IFT43Q96FT9 208 aa8.65□□□□□ -1.02
SNX6-204ENST00000555541 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
SNX6-204ENST00000555541 ADAMTS4O75173 837 aa8.64□□□□□ -1.03
SNX6-204ENST00000555541 RTN1Q16799 776 aa8.64□□□□□ -1.03
SNX6-204ENST00000555541 TAL1P17542 331 aaPredicted RBP8.63□□□□□ -1.03
SNX6-204ENST00000555541 GAS2L2Q8NHY3 880 aa8.63□□□□□ -1.03
SNX6-204ENST00000555541 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
SNX6-204ENST00000555541 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
SNX6-204ENST00000555541 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
SNX6-204ENST00000555541 IRAK1P51617 712 aa8.62□□□□□ -1.03
SNX6-204ENST00000555541 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
SNX6-204ENST00000555541 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
SNX6-204ENST00000555541 ZNF594Q96JF6 807 aaPredicted RBP8.62□□□□□ -1.03
SNX6-204ENST00000555541 COBLO75128 1261 aa8.61□□□□□ -1.03
SNX6-204ENST00000555541 MLLT1Q03111 559 aaPredicted RBP8.61□□□□□ -1.03
SNX6-204ENST00000555541 SCG3Q8WXD2 468 aaKnown RBP8.61□□□□□ -1.03
SNX6-204ENST00000555541 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
SNX6-204ENST00000555541 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
SNX6-204ENST00000555541 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
SNX6-204ENST00000555541 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
SNX6-204ENST00000555541 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
SNX6-204ENST00000555541 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
SNX6-204ENST00000555541 TGFB1P01137 390 aa8.59□□□□□ -1.03
SNX6-204ENST00000555541 SPINK2P20155 84 aa8.59□□□□□ -1.03
SNX6-204ENST00000555541 NRLP54845 237 aa8.59□□□□□ -1.03
SNX6-204ENST00000555541 GLMNQ92990 594 aa8.59□□□□□ -1.03
SNX6-204ENST00000555541 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 RASA1P20936 1047 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 IDH3AP50213 366 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 PTK7Q13308 1070 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 SETDB1Q15047 1291 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
SNX6-204ENST00000555541 UBL7Q96S82 380 aaPredicted RBP8.58□□□□□ -1.04
SNX6-204ENST00000555541 SEC13P55735 322 aa8.57□□□□□ -1.04
SNX6-204ENST00000555541 CRTC2Q53ET0 693 aaPredicted RBP8.57□□□□□ -1.04
SNX6-204ENST00000555541 KRT25Q7Z3Z0 450 aa8.57□□□□□ -1.04
SNX6-204ENST00000555541 RAXQ9Y2V3 346 aa8.57□□□□□ -1.04
SNX6-204ENST00000555541 TM4SF5O14894 197 aa8.56□□□□□ -1.04
SNX6-204ENST00000555541 SASH3O75995 380 aa8.56□□□□□ -1.04
SNX6-204ENST00000555541 HFE2Q6ZVN8 426 aa8.56□□□□□ -1.04
SNX6-204ENST00000555541 KRTAP4-9Q9BYQ8 210 aa8.56□□□□□ -1.04
SNX6-204ENST00000555541 KLK14Q9P0G3 267 aa8.56□□□□□ -1.04
SNX6-204ENST00000555541 LGR5O75473 907 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 EGFRP00533 1210 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 EPB42P16452 691 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 FZD5Q13467 585 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 ARMC10Q8N2F6 343 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
SNX6-204ENST00000555541 CHMP7Q8WUX9 453 aaPredicted RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
SNX6-204ENST00000555541 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
SNX6-204ENST00000555541 OPLAHO14841 1288 aa8.54□□□□□ -1.04
SNX6-204ENST00000555541 GSC2O15499 205 aa8.54□□□□□ -1.04
SNX6-204ENST00000555541 RARAP10276 462 aa8.54□□□□□ -1.04
SNX6-204ENST00000555541 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
SNX6-204ENST00000555541 PRR19A6NJB7 356 aa8.53□□□□□ -1.04
SNX6-204ENST00000555541 ARSDP51689 593 aa8.53□□□□□ -1.04
SNX6-204ENST00000555541 DPYDQ12882 1025 aa8.53□□□□□ -1.04
SNX6-204ENST00000555541 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
SNX6-204ENST00000555541 ARXQ96QS3 562 aa8.53□□□□□ -1.04
SNX6-204ENST00000555541 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
SNX6-204ENST00000555541 EIF2AK2P19525 551 aaKnown RBP8.52□□□□□ -1.05
SNX6-204ENST00000555541 IGFBP4P22692 258 aa8.52□□□□□ -1.05
SNX6-204ENST00000555541 J3QW42 95 aa8.51□□□□□ -1.05
SNX6-204ENST00000555541 MICAL2O94851 1124 aa8.51□□□□□ -1.05
SNX6-204ENST00000555541 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
SNX6-204ENST00000555541 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
SNX6-204ENST00000555541 GALNT11Q8NCW6 608 aa8.51□□□□□ -1.05
SNX6-204ENST00000555541 LOC102724428A0A0B4J2F2 783 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 A6NJR5 290 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 SIK1P57059 783 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 LARP1Q6PKG0 1096 aaKnown RBP8.5□□□□□ -1.05
SNX6-204ENST00000555541 ANKMY2Q8IV38 441 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 STOML1Q9UBI4 398 aa8.5□□□□□ -1.05
SNX6-204ENST00000555541 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms