RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TGFB1P01137 390 aa8.19□□□□□ -1.1
SRP54-207ENST00000555535 RTN1Q16799 776 aa8.19□□□□□ -1.1
SRP54-207ENST00000555535 PLEKHM2Q8IWE5 1019 aa8.19□□□□□ -1.1
SRP54-207ENST00000555535 ZBTB7BO15156 539 aaPredicted RBP8.18□□□□□ -1.1
SRP54-207ENST00000555535 GLB1P16278 677 aa8.18□□□□□ -1.1
SRP54-207ENST00000555535 SPINK2P20155 84 aa8.18□□□□□ -1.1
SRP54-207ENST00000555535 WWC1Q8IX03 1113 aa8.18□□□□□ -1.1
SRP54-207ENST00000555535 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
SRP54-207ENST00000555535 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
SRP54-207ENST00000555535 SMG9Q9H0W8 520 aaKnown RBP8.18□□□□□ -1.1
SRP54-207ENST00000555535 ALG2Q9H553 416 aa8.18□□□□□ -1.1
SRP54-207ENST00000555535 ALX3O95076 343 aa8.17□□□□□ -1.1
SRP54-207ENST00000555535 WNT11O96014 354 aa8.17□□□□□ -1.1
SRP54-207ENST00000555535 NRLP54845 237 aa8.17□□□□□ -1.1
SRP54-207ENST00000555535 DEPDC4Q8N2C3 294 aa8.17□□□□□ -1.1
SRP54-207ENST00000555535 MUC3BQ9H195 1237 aa8.17□□□□□ -1.1
SRP54-207ENST00000555535 ZBTB42B2RXF5 422 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 RARAP10276 462 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 ATAD2Q6PL18 1390 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 DTX1Q86Y01 620 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 ZDHHC13Q8IUH4 622 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 KIAA1024Q9UPX6 916 aa8.16□□□□□ -1.1
SRP54-207ENST00000555535 C21orf2O43822 256 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 EIF2AK2P19525 551 aaKnown RBP8.15□□□□□ -1.1
SRP54-207ENST00000555535 CLDN10P78369 228 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 NFIAQ12857 509 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 SIX5Q8N196 739 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 KRTAP4-9Q9BYQ8 210 aa8.15□□□□□ -1.1
SRP54-207ENST00000555535 DMGDHQ9UI17 866 aaKnown RBP8.15□□□□□ -1.1
SRP54-207ENST00000555535 INPP5BP32019 993 aa8.14□□□□□ -1.11
SRP54-207ENST00000555535 PLAURQ03405 335 aa8.14□□□□□ -1.11
SRP54-207ENST00000555535 TSEN2Q8NCE0 465 aaKnown RBP8.14□□□□□ -1.11
SRP54-207ENST00000555535 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
SRP54-207ENST00000555535 ZFATQ9P243 1243 aa8.14□□□□□ -1.11
SRP54-207ENST00000555535 ARSDP51689 593 aa8.13□□□□□ -1.11
SRP54-207ENST00000555535 MLLT1Q03111 559 aaPredicted RBP8.13□□□□□ -1.11
SRP54-207ENST00000555535 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
SRP54-207ENST00000555535 DBNDD2Q9BQY9 259 aa8.13□□□□□ -1.11
SRP54-207ENST00000555535 JAG1P78504 1218 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.12□□□□□ -1.11
SRP54-207ENST00000555535 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 SCG3Q8WXD2 468 aaKnown RBP8.12□□□□□ -1.11
SRP54-207ENST00000555535 PLD4Q96BZ4 506 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 IFT43Q96FT9 208 aa8.12□□□□□ -1.11
SRP54-207ENST00000555535 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 TARSP26639 723 aaKnown RBP8.11□□□□□ -1.11
SRP54-207ENST00000555535 IDH3AP50213 366 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
SRP54-207ENST00000555535 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
SRP54-207ENST00000555535 GHRHP01286 108 aa8.1□□□□□ -1.11
SRP54-207ENST00000555535 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
SRP54-207ENST00000555535 CHMP7Q8WUX9 453 aaPredicted RBP8.1□□□□□ -1.11
SRP54-207ENST00000555535 UBL7Q96S82 380 aaPredicted RBP8.1□□□□□ -1.11
SRP54-207ENST00000555535 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
SRP54-207ENST00000555535 ADAMTS4O75173 837 aa8.09□□□□□ -1.11
SRP54-207ENST00000555535 SASH3O75995 380 aa8.09□□□□□ -1.11
SRP54-207ENST00000555535 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.11
SRP54-207ENST00000555535 BCANQ96GW7 911 aa8.09□□□□□ -1.11
SRP54-207ENST00000555535 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
SRP54-207ENST00000555535 PSAPP07602 524 aa8.08□□□□□ -1.12
SRP54-207ENST00000555535 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
SRP54-207ENST00000555535 SIK1P57059 783 aa8.08□□□□□ -1.12
SRP54-207ENST00000555535 GDF6Q6KF10 455 aaPredicted RBP8.08□□□□□ -1.12
SRP54-207ENST00000555535 HFE2Q6ZVN8 426 aa8.08□□□□□ -1.12
SRP54-207ENST00000555535 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
SRP54-207ENST00000555535 C7orf69Q9H7B7 122 aa8.08□□□□□ -1.12
SRP54-207ENST00000555535 PRR19A6NJB7 356 aa8.07□□□□□ -1.12
SRP54-207ENST00000555535 EGFRP00533 1210 aa8.07□□□□□ -1.12
SRP54-207ENST00000555535 HOXD8P13378 290 aaPredicted RBP8.07□□□□□ -1.12
SRP54-207ENST00000555535 ARMC10Q8N2F6 343 aa8.07□□□□□ -1.12
SRP54-207ENST00000555535 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
SRP54-207ENST00000555535 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
SRP54-207ENST00000555535 SOX18P35713 384 aa8.06□□□□□ -1.12
SRP54-207ENST00000555535 SEC13P55735 322 aa8.06□□□□□ -1.12
SRP54-207ENST00000555535 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
SRP54-207ENST00000555535 ATP9BO43861 1147 aa8.05□□□□□ -1.12
SRP54-207ENST00000555535 MCM6Q14566 821 aa8.05□□□□□ -1.12
SRP54-207ENST00000555535 TRIM42Q8IWZ5 723 aa8.05□□□□□ -1.12
SRP54-207ENST00000555535 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
SRP54-207ENST00000555535 FAM46AQ96IP4 442 aaKnown RBP8.05□□□□□ -1.12
SRP54-207ENST00000555535 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
SRP54-207ENST00000555535 MYRFLQ96LU7 910 aa8.05□□□□□ -1.12
SRP54-207ENST00000555535 MICAL2O94851 1124 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 DKK1O94907 266 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 IGFBP4P22692 258 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 CD68P34810 354 aaPredicted RBP8.04□□□□□ -1.12
SRP54-207ENST00000555535 OGFOD2Q6N063 350 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 POU5F2Q8N7G0 328 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
SRP54-207ENST00000555535 ACAD11Q709F0 780 aa8.03□□□□□ -1.12
SRP54-207ENST00000555535 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
SRP54-207ENST00000555535 FAM83CQ9BQN1 747 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms