RNA–Protein interactions for RNA: ENST00000555412.1

SRSF5-210, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-210ENST00000555412 DPEP1P16444 411 aa17.32■□□□□ 0.36
SRSF5-210ENST00000555412 CHRNA5P30532 468 aa17.32■□□□□ 0.36
SRSF5-210ENST00000555412 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
SRSF5-210ENST00000555412 CTSWP56202 376 aa17.32■□□□□ 0.36
SRSF5-210ENST00000555412 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
SRSF5-210ENST00000555412 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
SRSF5-210ENST00000555412 DLEC1Q9Y238 1755 aa17.31■□□□□ 0.36
SRSF5-210ENST00000555412 CCDC152Q4G0S7 254 aa17.31■□□□□ 0.36
SRSF5-210ENST00000555412 EPHA10Q5JZY3 1008 aa17.31■□□□□ 0.36
SRSF5-210ENST00000555412 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
SRSF5-210ENST00000555412 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
SRSF5-210ENST00000555412 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
SRSF5-210ENST00000555412 GNAI2P04899 355 aa17.3■□□□□ 0.36
SRSF5-210ENST00000555412 ALDH1B1P30837 517 aa17.3■□□□□ 0.36
SRSF5-210ENST00000555412 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
SRSF5-210ENST00000555412 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
SRSF5-210ENST00000555412 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
SRSF5-210ENST00000555412 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
SRSF5-210ENST00000555412 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
SRSF5-210ENST00000555412 LMBR1LQ6UX01 489 aa17.29■□□□□ 0.36
SRSF5-210ENST00000555412 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
SRSF5-210ENST00000555412 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
SRSF5-210ENST00000555412 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.362e-8■□□□□ 10.2
SRSF5-210ENST00000555412 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
SRSF5-210ENST00000555412 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
SRSF5-210ENST00000555412 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
SRSF5-210ENST00000555412 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
SRSF5-210ENST00000555412 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
SRSF5-210ENST00000555412 TAF1P21675 1872 aa17.27■□□□□ 0.36
SRSF5-210ENST00000555412 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
SRSF5-210ENST00000555412 CRBNQ96SW2 442 aa17.27■□□□□ 0.36
SRSF5-210ENST00000555412 GREM2Q9H772 168 aa17.27■□□□□ 0.36
SRSF5-210ENST00000555412 BBOX1O75936 387 aa17.26■□□□□ 0.35
SRSF5-210ENST00000555412 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
SRSF5-210ENST00000555412 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
SRSF5-210ENST00000555412 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
SRSF5-210ENST00000555412 MTX1Q13505 466 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 GRAPQ13588 217 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
SRSF5-210ENST00000555412 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
SRSF5-210ENST00000555412 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
SRSF5-210ENST00000555412 SEC31BQ9NQW1 1179 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 SLX4Q8IY92 1834 aa17.25■□□□□ 0.35
SRSF5-210ENST00000555412 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
SRSF5-210ENST00000555412 ITGA6P23229 1130 aa17.24■□□□□ 0.35
SRSF5-210ENST00000555412 AAMPQ13685 434 aa17.24■□□□□ 0.35
SRSF5-210ENST00000555412 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
SRSF5-210ENST00000555412 CACNA1SQ13698 1873 aa17.24■□□□□ 0.35
SRSF5-210ENST00000555412 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
SRSF5-210ENST00000555412 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
SRSF5-210ENST00000555412 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
SRSF5-210ENST00000555412 ANKRD18AQ8IVF6 992 aa17.23■□□□□ 0.35
SRSF5-210ENST00000555412 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
SRSF5-210ENST00000555412 C1orf115Q9H7X2 142 aa17.23■□□□□ 0.35
SRSF5-210ENST00000555412 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
SRSF5-210ENST00000555412 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
SRSF5-210ENST00000555412 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
SRSF5-210ENST00000555412 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
SRSF5-210ENST00000555412 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
SRSF5-210ENST00000555412 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
SRSF5-210ENST00000555412 BSDC1Q9NW68 430 aaPredicted RBP17.21■□□□□ 0.35
SRSF5-210ENST00000555412 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
SRSF5-210ENST00000555412 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
SRSF5-210ENST00000555412 SRGAP3O43295 1099 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
SRSF5-210ENST00000555412 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
SRSF5-210ENST00000555412 POLA2Q14181 598 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
SRSF5-210ENST00000555412 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 COL4A1P02462 1669 aa17.19■□□□□ 0.34
SRSF5-210ENST00000555412 C21orf2O43822 256 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 PTPN12Q05209 780 aaKnown RBP17.18■□□□□ 0.34
SRSF5-210ENST00000555412 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
SRSF5-210ENST00000555412 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
SRSF5-210ENST00000555412 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
SRSF5-210ENST00000555412 HMMRO75330 724 aa17.16■□□□□ 0.34
SRSF5-210ENST00000555412 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
SRSF5-210ENST00000555412 GPR162Q16538 588 aa17.16■□□□□ 0.34
SRSF5-210ENST00000555412 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
SRSF5-210ENST00000555412 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
SRSF5-210ENST00000555412 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
SRSF5-210ENST00000555412 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
SRSF5-210ENST00000555412 EYA2O00167 538 aa17.15■□□□□ 0.34
SRSF5-210ENST00000555412 CIAO1O76071 339 aa17.15■□□□□ 0.34
SRSF5-210ENST00000555412 CCDC93Q567U6 631 aa17.15■□□□□ 0.34
SRSF5-210ENST00000555412 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms