RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 CTSWP56202 376 aa15.15■□□□□ 0.02
ACTN1-214ENST00000555075 CRY2Q49AN0 593 aa15.15■□□□□ 0.02
ACTN1-214ENST00000555075 ITPRIPQ8IWB1 547 aa15.15■□□□□ 0.02
ACTN1-214ENST00000555075 CDC5LQ99459 802 aaKnown RBP15.15■□□□□ 0.02
ACTN1-214ENST00000555075 BBOX1O75936 387 aa15.14■□□□□ 0.01
ACTN1-214ENST00000555075 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-214ENST00000555075 GRAPQ13588 217 aa15.14■□□□□ 0.01
ACTN1-214ENST00000555075 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
ACTN1-214ENST00000555075 CCDC93Q567U6 631 aa15.14■□□□□ 0.01
ACTN1-214ENST00000555075 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
ACTN1-214ENST00000555075 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-214ENST00000555075 GNAI3P08754 354 aa15.13■□□□□ 0.01
ACTN1-214ENST00000555075 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
ACTN1-214ENST00000555075 C1QTNF8P60827 252 aa15.13■□□□□ 0.01
ACTN1-214ENST00000555075 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
ACTN1-214ENST00000555075 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
ACTN1-214ENST00000555075 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-214ENST00000555075 ABCC4O15439 1325 aa15.13■□□□□ 0.01
ACTN1-214ENST00000555075 ANKRD18BA2A2Z9 1011 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 MPHOSPH8Q99549 860 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
ACTN1-214ENST00000555075 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
ACTN1-214ENST00000555075 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
ACTN1-214ENST00000555075 IFIT5Q13325 482 aaKnown RBP15.11■□□□□ 0.01
ACTN1-214ENST00000555075 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
ACTN1-214ENST00000555075 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
ACTN1-214ENST00000555075 LMBR1LQ6UX01 489 aa15.11■□□□□ 0.01
ACTN1-214ENST00000555075 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
ACTN1-214ENST00000555075 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
ACTN1-214ENST00000555075 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
ACTN1-214ENST00000555075 NBPF7P0C2Y1 421 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-214ENST00000555075 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
ACTN1-214ENST00000555075 TTLL11Q8NHH1 800 aa15.1■□□□□ 0.01
ACTN1-214ENST00000555075 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
ACTN1-214ENST00000555075 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
ACTN1-214ENST00000555075 GPBP1L1Q9HC44 474 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-214ENST00000555075 PLIN1O60240 522 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 ITGA6P23229 1130 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-214ENST00000555075 SP8Q8IXZ3 490 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 GREM2Q9H772 168 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 ATP6V0A2Q9Y487 856 aa15.09■□□□□ 0.01
ACTN1-214ENST00000555075 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-214ENST00000555075 G3V3G9 751 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 CASP7P55210 303 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 FAM161AQ3B820 660 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 MPNDQ8N594 471 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 CELF1Q92879 486 aaKnown RBP15.08■□□□□ 0
ACTN1-214ENST00000555075 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 TNNQ9UQP3 1299 aa15.08■□□□□ 0
ACTN1-214ENST00000555075 DLEC1Q9Y238 1755 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 GNAI2P04899 355 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 PANK1Q8TE04 598 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 MEIS3Q99687 375 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
ACTN1-214ENST00000555075 CNNM1Q9NRU3 951 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 RNF181Q9P0P0 153 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
ACTN1-214ENST00000555075 UTYO14607 1347 aa15.07■□□□□ 0
ACTN1-214ENST00000555075 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 C6orf229H3BNL8 230 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 CSF1RP07333 972 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 LMNB1P20700 586 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 KCNJ4P48050 445 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 FOXO4P98177 505 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 FKBP4Q02790 459 aaKnown RBP eCLIP15.06■□□□□ 0
ACTN1-214ENST00000555075 RASSF7Q02833 373 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
ACTN1-214ENST00000555075 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
ACTN1-214ENST00000555075 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
ACTN1-214ENST00000555075 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 JDP2Q8WYK2 163 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 EYA3Q99504 573 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 COG6Q9Y2V7 657 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 RTL9Q8NET4 1388 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 LAMB2P55268 1798 aa15.05■□□□□ -0
ACTN1-214ENST00000555075 PDE3AQ14432 1141 aa15.04■□□□□ -0
ACTN1-214ENST00000555075 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
ACTN1-214ENST00000555075 EPHA10Q5JZY3 1008 aa15.04■□□□□ -0
ACTN1-214ENST00000555075 OLFM4Q6UX06 510 aa15.04■□□□□ -0
ACTN1-214ENST00000555075 LDHAL6AQ6ZMR3 332 aa15.04■□□□□ -0
ACTN1-214ENST00000555075 ANKRD2Q9GZV1 360 aa15.04■□□□□ -0
ACTN1-214ENST00000555075 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
ACTN1-214ENST00000555075 CACNA1SQ13698 1873 aa15.03■□□□□ -0
ACTN1-214ENST00000555075 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
ACTN1-214ENST00000555075 LARGE2Q8N3Y3 721 aa15.03■□□□□ -0
ACTN1-214ENST00000555075 C7orf43Q8WVR3 580 aa15.03■□□□□ -0
ACTN1-214ENST00000555075 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
ACTN1-214ENST00000555075 GGA1Q9UJY5 639 aa15.03■□□□□ -0
ACTN1-214ENST00000555075 XDHP47989 1333 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 LTBP3Q9NS15 1303 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 SLX4Q8IY92 1834 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 NFKBIEO00221 500 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms