RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 GAS2L3Q86XJ1 694 aa25.48■■□□□ 1.67
ARHGEF40-204ENST00000555038 DBNDD2Q9BQY9 259 aa25.48■■□□□ 1.67
ARHGEF40-204ENST00000555038 BTG4Q9NY30 223 aa25.48■■□□□ 1.67
ARHGEF40-204ENST00000555038 EYA2O00167 538 aa25.47■■□□□ 1.67
ARHGEF40-204ENST00000555038 STARD3NLO95772 234 aa25.47■■□□□ 1.67
ARHGEF40-204ENST00000555038 ADCK5Q3MIX3 580 aa25.47■■□□□ 1.67
ARHGEF40-204ENST00000555038 CHMP3Q9Y3E7 222 aa25.47■■□□□ 1.67
ARHGEF40-204ENST00000555038 KRT32Q14532 448 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 KIF6Q6ZMV9 814 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 SMC3Q9UQE7 1217 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 PALLDQ8WX93 1383 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 SPEF2Q9C093 1822 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 LTBP4Q8N2S1 1624 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 TAF5LO75529 589 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 ARXQ96QS3 562 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 PLA2G12BQ9BX93 195 aa25.46■■□□□ 1.67
ARHGEF40-204ENST00000555038 CAVIN1Q6NZI2 390 aaKnown RBP25.45■■□□□ 1.66
ARHGEF40-204ENST00000555038 PIGBQ92521 554 aa25.45■■□□□ 1.66
ARHGEF40-204ENST00000555038 ZNF609O15014 1411 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 ITGB4P16144 1822 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 ZSCAN23Q3MJ62 389 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 KBTBD3Q8NAB2 608 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 GPT2Q8TD30 523 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 PANK2Q9BZ23 570 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 SH3TC1Q8TE82 1336 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 PCCAP05165 728 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 NCLP19338 710 aaKnown RBP25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 ATP6V1DQ9Y5K8 247 aa25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 U3KPZ7 1027 aaPredicted RBP25.44■■□□□ 1.66
ARHGEF40-204ENST00000555038 BLOC1S2Q6QNY1 142 aa25.43■■□□□ 1.66
ARHGEF40-204ENST00000555038 TMEM87AQ8NBN3 555 aa25.43■■□□□ 1.66
ARHGEF40-204ENST00000555038 BCL9O00512 1426 aa25.43■■□□□ 1.66
ARHGEF40-204ENST00000555038 ZSCAN22P10073 491 aaPredicted RBP25.42■■□□□ 1.66
ARHGEF40-204ENST00000555038 MCMDC2Q4G0Z9 681 aa25.42■■□□□ 1.66
ARHGEF40-204ENST00000555038 HSP90AB3PQ58FF7 597 aa25.42■■□□□ 1.66
ARHGEF40-204ENST00000555038 ZNF589Q86UQ0 364 aaPredicted RBP25.42■■□□□ 1.66
ARHGEF40-204ENST00000555038 STX6O43752 255 aa25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 DNAJC10Q8IXB1 793 aa25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 ASAP1Q9ULH1 1129 aa25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 CPA1P15085 419 aa25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 RPS6KB1P23443 525 aa25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 DNAJC2Q99543 621 aaKnown RBP25.41■■□□□ 1.66
ARHGEF40-204ENST00000555038 MAP3K15Q6ZN16 1313 aa25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 FOXD4L5Q5VV16 416 aaPredicted RBP25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 FOXD4L4Q8WXT5 416 aaPredicted RBP25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 EDC3Q96F86 508 aaKnown RBP25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 HELLSQ9NRZ9 838 aa25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 WNK3Q9BYP7 1800 aa25.4■■□□□ 1.66
ARHGEF40-204ENST00000555038 CDHR2Q9BYE9 1310 aa25.39■■□□□ 1.66
ARHGEF40-204ENST00000555038 SYT1P21579 422 aa25.39■■□□□ 1.66
ARHGEF40-204ENST00000555038 CCDC57Q2TAC2 916 aa25.39■■□□□ 1.66
ARHGEF40-204ENST00000555038 ZBTB38Q8NAP3 1195 aaPredicted RBP25.39■■□□□ 1.66
ARHGEF40-204ENST00000555038 SYAP1Q96A49 352 aaPredicted RBP25.39■■□□□ 1.66
ARHGEF40-204ENST00000555038 LARGE1O95461 756 aa25.39■■□□□ 1.65
ARHGEF40-204ENST00000555038 GIGYF2Q6Y7W6 1299 aaKnown RBP25.39■■□□□ 1.65
ARHGEF40-204ENST00000555038 NEUROD6Q96NK8 337 aa25.39■■□□□ 1.65
ARHGEF40-204ENST00000555038 PAG1Q9NWQ8 432 aa25.39■■□□□ 1.65
ARHGEF40-204ENST00000555038 AKAP2Q9Y2D5 859 aa25.39■■□□□ 1.65
ARHGEF40-204ENST00000555038 COL16A1Q07092 1604 aaPredicted RBP25.38■■□□□ 1.65
ARHGEF40-204ENST00000555038 ROBO1Q9Y6N7 1651 aa25.38■■□□□ 1.65
ARHGEF40-204ENST00000555038 CCDC83Q8IWF9 413 aa25.38■■□□□ 1.65
ARHGEF40-204ENST00000555038 CDCA7Q9BWT1 371 aaPredicted RBP25.38■■□□□ 1.65
ARHGEF40-204ENST00000555038 CEP126Q9P2H0 1117 aa25.38■■□□□ 1.65
ARHGEF40-204ENST00000555038 CSF1RP07333 972 aa25.37■■□□□ 1.65
ARHGEF40-204ENST00000555038 F13A1P00488 732 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 ME3Q16798 604 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 LRRFIP1Q32MZ4 808 aaKnown RBP25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 ANP32BQ92688 251 aaKnown RBP25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 ABCC12Q96J65 1359 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 A0A1B0GUL7 405 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 EXOC5O00471 708 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 GJB2P29033 226 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 NASPP49321 788 aaPredicted RBP25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 CSPP1Q1MSJ5 1256 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 LRRC24Q50LG9 513 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 DDX46Q7L014 1031 aaKnown RBP25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 KLHL34Q8N239 644 aa25.36■■□□□ 1.65
ARHGEF40-204ENST00000555038 ANKRD36CQ5JPF3 1778 aa25.35■■□□□ 1.65
ARHGEF40-204ENST00000555038 TPCN1Q9ULQ1 816 aa25.35■■□□□ 1.65
ARHGEF40-204ENST00000555038 PDCP20941 246 aa25.34■■□□□ 1.65
ARHGEF40-204ENST00000555038 CCDC173Q0VFZ6 552 aa25.34■■□□□ 1.65
ARHGEF40-204ENST00000555038 LRSAM1Q6UWE0 723 aa25.34■■□□□ 1.65
ARHGEF40-204ENST00000555038 DSCC1Q9BVC3 393 aa25.34■■□□□ 1.65
ARHGEF40-204ENST00000555038 TMEM63CQ9P1W3 806 aa25.34■■□□□ 1.65
ARHGEF40-204ENST00000555038 IFIT1P09914 478 aaKnown RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 CYP19A1P11511 503 aaPredicted RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 TIMM10P62072 90 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 RTN4Q9NQC3 1192 aaKnown RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 PHF14O94880 888 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 HMGB1P09429 215 aaKnown RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 ST3GAL1Q11201 340 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 ZMYM1Q5SVZ6 1142 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 ZNF594Q96JF6 807 aaPredicted RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 CHAMP1Q96JM3 812 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 NEK1Q96PY6 1258 aa25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 LARP6Q9BRS8 491 aaKnown RBP25.33■■□□□ 1.65
ARHGEF40-204ENST00000555038 GOLIM4O00461 696 aa25.32■■□□□ 1.64
ARHGEF40-204ENST00000555038 IFIT5Q13325 482 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms