RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 A6NJY4 79 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 UBAP2LQ14157 1087 aaKnown RBP7.56□□□□□ -1.2
ATXN3-228ENST00000554592 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-228ENST00000554592 CNTNAP3BQ96NU0 1288 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 MKRN1Q9UHC7 482 aaKnown RBP7.56□□□□□ -1.2
ATXN3-228ENST00000554592 TET3O43151 1660 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
ATXN3-228ENST00000554592 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-228ENST00000554592 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 A0A1B0GTH6 734 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 FOXK2Q01167 660 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-228ENST00000554592 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-228ENST00000554592 EFCAB6Q5THR3 1501 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
ATXN3-228ENST00000554592 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 MSX1P28360 303 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 OGFOD1Q8N543 542 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
ATXN3-228ENST00000554592 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-228ENST00000554592 NOS1P29475 1434 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ATXN3-228ENST00000554592 H7C1W4 665 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 BACH1O14867 736 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 SLURP2P0DP57 97 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 SIX5Q8N196 739 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
ATXN3-228ENST00000554592 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
ATXN3-228ENST00000554592 ABCC5O15440 1437 aa7.52□□□□□ -1.2
ATXN3-228ENST00000554592 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-228ENST00000554592 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 GPR25O00155 361 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 ATP4AP20648 1035 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-228ENST00000554592 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 CFAP70Q5T0N1 1121 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 TPCN2Q8NHX9 752 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 GTPBP3Q969Y2 492 aaKnown RBP7.52□□□□□ -1.21
ATXN3-228ENST00000554592 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 NIFKQ9BYG3 293 aaKnown RBP7.52□□□□□ -1.21
ATXN3-228ENST00000554592 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
ATXN3-228ENST00000554592 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
ATXN3-228ENST00000554592 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 M0R2N6 131 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 PLA2G4AP47712 749 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 PSME1Q06323 249 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
ATXN3-228ENST00000554592 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-228ENST00000554592 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-228ENST00000554592 LBRQ14739 615 aaKnown RBP7.5□□□□□ -1.21
ATXN3-228ENST00000554592 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 NDFIP2Q9NV92 336 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 ZFYVE9O95405 1425 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-228ENST00000554592 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 RFX1P22670 979 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 SRSF11Q05519 484 aaKnown RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 PTK7Q13308 1070 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 TEAD4Q15561 434 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 C7orf43Q8WVR3 580 aa7.49□□□□□ -1.21
ATXN3-228ENST00000554592 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-228ENST00000554592 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 RASA1P20936 1047 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-228ENST00000554592 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
ATXN3-228ENST00000554592 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms