RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 CCP110O43303 1012 aa13.06□□□□□ -0.32
NUMB-212ENST00000554546 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
NUMB-212ENST00000554546 ABCD1P33897 745 aa13.06□□□□□ -0.32
NUMB-212ENST00000554546 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
NUMB-212ENST00000554546 KCND1Q9NSA2 647 aa13.06□□□□□ -0.32
NUMB-212ENST00000554546 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
NUMB-212ENST00000554546 ICA1Q05084 483 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 PPP2R3AQ06190 1150 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
NUMB-212ENST00000554546 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
NUMB-212ENST00000554546 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 CRACR2AQ9BSW2 395 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
NUMB-212ENST00000554546 BECN2A8MW95 431 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 APBB1O00213 710 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 RPSAP08865 295 aaKnown RBP13.04□□□□□ -0.32
NUMB-212ENST00000554546 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
NUMB-212ENST00000554546 FAM71BQ8TC56 605 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
NUMB-212ENST00000554546 CHCHD3Q9NX63 227 aaKnown RBP13.04□□□□□ -0.32
NUMB-212ENST00000554546 GOLGA6L4A6NEF3 574 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
NUMB-212ENST00000554546 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
NUMB-212ENST00000554546 BRD3Q15059 726 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 AFAP1L1Q8TED9 768 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 SAAL1Q96ER3 474 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 FANCGO15287 622 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 TUBB4AP04350 444 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 POLD1P28340 1107 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 GSDMDP57764 484 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
NUMB-212ENST00000554546 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 DRAXINQ8NBI3 349 aaPredicted RBP13.03□□□□□ -0.32
NUMB-212ENST00000554546 ROCK1Q13464 1354 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 KCNB1Q14721 858 aa13.03□□□□□ -0.32
NUMB-212ENST00000554546 TXLNAP40222 546 aa13.02□□□□□ -0.32
NUMB-212ENST00000554546 USP4Q13107 963 aa13.02□□□□□ -0.32
NUMB-212ENST00000554546 GOLGA1Q92805 767 aa13.02□□□□□ -0.32
NUMB-212ENST00000554546 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.32
NUMB-212ENST00000554546 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.32
NUMB-212ENST00000554546 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.33
NUMB-212ENST00000554546 CEP85LQ5SZL2 805 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 NRDCO43847 1150 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 RAB27AP51159 221 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 HHATQ5VTY9 493 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 RSRC2Q7L4I2 434 aaKnown RBP13.02□□□□□ -0.33
NUMB-212ENST00000554546 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
NUMB-212ENST00000554546 ZNF644Q9H582 1327 aaPredicted RBP13.02□□□□□ -0.33
NUMB-212ENST00000554546 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
NUMB-212ENST00000554546 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
NUMB-212ENST00000554546 WLSQ5T9L3 541 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 TRIM65Q6PJ69 517 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 CEP112Q8N8E3 955 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
NUMB-212ENST00000554546 DAPK1P53355 1430 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 VPS37CA5D8V6 355 aaPredicted RBP13.01□□□□□ -0.33
NUMB-212ENST00000554546 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
NUMB-212ENST00000554546 RNF40O75150 1001 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 E2F5Q15329 346 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 THEMIS2Q5TEJ8 643 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
NUMB-212ENST00000554546 ABCB6Q9NP58 842 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 SAMM50Q9Y512 469 aa13.01□□□□□ -0.33
NUMB-212ENST00000554546 EHBP1L1Q8N3D4 1523 aa13□□□□□ -0.33
NUMB-212ENST00000554546 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
NUMB-212ENST00000554546 SETSIPP0DME0 302 aa13□□□□□ -0.33
NUMB-212ENST00000554546 CHMLP26374 656 aa13□□□□□ -0.33
NUMB-212ENST00000554546 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
NUMB-212ENST00000554546 KLC4Q9NSK0 619 aa13□□□□□ -0.33
NUMB-212ENST00000554546 MRFAP1Q9Y605 127 aa13□□□□□ -0.33
NUMB-212ENST00000554546 RANBP1P43487 201 aa13□□□□□ -0.33
NUMB-212ENST00000554546 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
NUMB-212ENST00000554546 ATAD2Q6PL18 1390 aa13□□□□□ -0.33
NUMB-212ENST00000554546 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
NUMB-212ENST00000554546 ERLIN1O75477 346 aa13□□□□□ -0.33
NUMB-212ENST00000554546 CASP8Q14790 479 aa13□□□□□ -0.33
NUMB-212ENST00000554546 C11orf57Q6ZUT1 292 aaPredicted RBP13□□□□□ -0.33
NUMB-212ENST00000554546 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
NUMB-212ENST00000554546 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
NUMB-212ENST00000554546 RMI1Q9H9A7 625 aa13□□□□□ -0.33
NUMB-212ENST00000554546 L1RE1Q9UN81 338 aa13□□□□□ -0.33
NUMB-212ENST00000554546 KIAA0754O94854 1291 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 EZRP15311 586 aaKnown RBP12.99□□□□□ -0.33
NUMB-212ENST00000554546 PRPHP41219 470 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 FNTAP49354 379 aa12.99□□□□□ -0.33
NUMB-212ENST00000554546 IQCB1Q15051 598 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms