RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 RBBP6Q7Z6E9 1792 aaKnown RBP22.68■■□□□ 1.22
NEK9-204ENST00000554258 COL6A3P12111 3177 aa22.68■■□□□ 1.22
NEK9-204ENST00000554258 GPR25O00155 361 aa22.68■■□□□ 1.22
NEK9-204ENST00000554258 TBC1D10BQ4KMP7 808 aaPredicted RBP22.68■■□□□ 1.22
NEK9-204ENST00000554258 KCNQ3O43525 872 aa22.67■■□□□ 1.22
NEK9-204ENST00000554258 ATP6V0A2Q9Y487 856 aa22.67■■□□□ 1.22
NEK9-204ENST00000554258 NUP98P52948 1817 aa22.66■■□□□ 1.22
NEK9-204ENST00000554258 RTFDC1Q9BY42 306 aaPredicted RBP22.66■■□□□ 1.22
NEK9-204ENST00000554258 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
NEK9-204ENST00000554258 BTBD11A6QL63 1104 aa22.65■■□□□ 1.22
NEK9-204ENST00000554258 GNAT3A8MTJ3 354 aa22.65■■□□□ 1.22
NEK9-204ENST00000554258 KIAA2012Q0VF49 1180 aa22.65■■□□□ 1.22
NEK9-204ENST00000554258 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
NEK9-204ENST00000554258 INTS3Q68E01 1043 aaKnown RBP22.65■■□□□ 1.22
NEK9-204ENST00000554258 DPP8Q6V1X1 898 aaPredicted RBP22.65■■□□□ 1.22
NEK9-204ENST00000554258 ZBTB12Q9Y330 459 aaPredicted RBP22.65■■□□□ 1.22
NEK9-204ENST00000554258 SULF1Q8IWU6 871 aa22.64■■□□□ 1.21
NEK9-204ENST00000554258 NBPF26B4DH59 902 aa22.63■■□□□ 1.21
NEK9-204ENST00000554258 FKTNO75072 461 aa22.63■■□□□ 1.21
NEK9-204ENST00000554258 EGFRP00533 1210 aa22.63■■□□□ 1.21
NEK9-204ENST00000554258 RBM26Q5T8P6 1007 aaKnown RBP22.63■■□□□ 1.21
NEK9-204ENST00000554258 NBPF10Q6P3W6 841 aaKnown RBP22.63■■□□□ 1.21
NEK9-204ENST00000554258 DPF2Q92785 391 aa22.63■■□□□ 1.21
NEK9-204ENST00000554258 RANBP2P49792 3224 aaKnown RBP22.63■■□□□ 1.21
NEK9-204ENST00000554258 YDJCA8MPS7 323 aa22.62■■□□□ 1.21
NEK9-204ENST00000554258 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
NEK9-204ENST00000554258 CDCA5Q96FF9 252 aa22.62■■□□□ 1.21
NEK9-204ENST00000554258 PANK3Q9H999 370 aa22.61■■□□□ 1.21
NEK9-204ENST00000554258 MPNDQ8N594 471 aa22.6■■□□□ 1.21
NEK9-204ENST00000554258 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
NEK9-204ENST00000554258 GAS2L2Q8NHY3 880 aa22.59■■□□□ 1.21
NEK9-204ENST00000554258 GGA3Q9NZ52 723 aa22.59■■□□□ 1.21
NEK9-204ENST00000554258 IBTKQ9P2D0 1353 aaPredicted RBP22.59■■□□□ 1.21
NEK9-204ENST00000554258 PSMD14O00487 310 aa22.57■■□□□ 1.2
NEK9-204ENST00000554258 EN2P19622 333 aaPredicted RBP22.57■■□□□ 1.2
NEK9-204ENST00000554258 GPTP24298 496 aa22.57■■□□□ 1.2
NEK9-204ENST00000554258 FKBP1BP68106 108 aa22.57■■□□□ 1.2
NEK9-204ENST00000554258 CEMIPQ8WUJ3 1361 aa22.57■■□□□ 1.2
NEK9-204ENST00000554258 TM4SF4P48230 202 aa22.56■■□□□ 1.2
NEK9-204ENST00000554258 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
NEK9-204ENST00000554258 ABCC4O15439 1325 aa22.56■■□□□ 1.2
NEK9-204ENST00000554258 KIF4BQ2VIQ3 1234 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 SUSD4Q5VX71 490 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 SP8Q8IXZ3 490 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 NGEFQ8N5V2 710 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 UBN2Q6ZU65 1347 aa22.55■■□□□ 1.2
NEK9-204ENST00000554258 ERVV-1B6SEH8 477 aa22.54■■□□□ 1.2
NEK9-204ENST00000554258 RPS12P25398 132 aaKnown RBP22.54■■□□□ 1.2
NEK9-204ENST00000554258 DIAPH1O60610 1272 aaKnown RBP22.53■■□□□ 1.2
NEK9-204ENST00000554258 BBOX1O75936 387 aa22.53■■□□□ 1.2
NEK9-204ENST00000554258 OTUD5Q96G74 571 aa22.53■■□□□ 1.2
NEK9-204ENST00000554258 R3HDMLQ9H3Y0 253 aa22.53■■□□□ 1.2
NEK9-204ENST00000554258 ASTN2O75129 1339 aaPredicted RBP22.53■■□□□ 1.2
NEK9-204ENST00000554258 H0YGN5 161 aa22.52■■□□□ 1.2
NEK9-204ENST00000554258 MAP3K15Q6ZN16 1313 aa22.52■■□□□ 1.2
NEK9-204ENST00000554258 NTSR2O95665 410 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 KIF6Q6ZMV9 814 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 MOB2Q70IA6 237 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 OTOP1Q7RTM1 612 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 CFHR5Q9BXR6 569 aa22.51■■□□□ 1.19
NEK9-204ENST00000554258 UBE2Q2LH0YL09 131 aa22.5■■□□□ 1.19
NEK9-204ENST00000554258 MKRN3Q13064 507 aaKnown RBP22.5■■□□□ 1.19
NEK9-204ENST00000554258 CHRDL2Q6WN34 429 aa22.5■■□□□ 1.19
NEK9-204ENST00000554258 DBNDD1Q9H9R9 158 aa22.5■■□□□ 1.19
NEK9-204ENST00000554258 LAMB4A4D0S4 1761 aa22.5■■□□□ 1.19
NEK9-204ENST00000554258 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
NEK9-204ENST00000554258 LAMB2P55268 1798 aa22.49■■□□□ 1.19
NEK9-204ENST00000554258 ANGEL2Q5VTE6 544 aaKnown RBP22.48■■□□□ 1.19
NEK9-204ENST00000554258 PPP1R42Q7Z4L9 355 aa22.48■■□□□ 1.19
NEK9-204ENST00000554258 TMEM106CQ9BVX2 250 aa22.48■■□□□ 1.19
NEK9-204ENST00000554258 TAF1P21675 1872 aa22.47■■□□□ 1.19
NEK9-204ENST00000554258 MNX1P50219 401 aaPredicted RBP22.47■■□□□ 1.19
NEK9-204ENST00000554258 ARMC5Q96C12 935 aa22.47■■□□□ 1.19
NEK9-204ENST00000554258 ZBTB3Q9H5J0 574 aa22.47■■□□□ 1.19
NEK9-204ENST00000554258 DDX60Q8IY21 1712 aaKnown RBP22.47■■□□□ 1.19
NEK9-204ENST00000554258 ANKRD36CQ5JPF3 1778 aa22.47■■□□□ 1.19
NEK9-204ENST00000554258 TTLL12Q14166 644 aaPredicted RBP22.46■■□□□ 1.19
NEK9-204ENST00000554258 WASHC4Q2M389 1173 aa22.46■■□□□ 1.19
NEK9-204ENST00000554258 TTLL7Q6ZT98 887 aa22.46■■□□□ 1.19
NEK9-204ENST00000554258 PTPN22Q9Y2R2 807 aa22.46■■□□□ 1.19
NEK9-204ENST00000554258 KNSTRNQ9Y448 316 aa22.46■■□□□ 1.19
NEK9-204ENST00000554258 ZNF34Q8IZ26 560 aa22.45■■□□□ 1.18
NEK9-204ENST00000554258 RIMBP2O15034 1052 aa22.44■■□□□ 1.18
NEK9-204ENST00000554258 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
NEK9-204ENST00000554258 ALDH1A1P00352 501 aa22.44■■□□□ 1.18
NEK9-204ENST00000554258 SCARF1Q14162 830 aa22.44■■□□□ 1.18
NEK9-204ENST00000554258 RTL9Q8NET4 1388 aa22.44■■□□□ 1.18
NEK9-204ENST00000554258 KCNQ5Q9NR82 932 aa22.44■■□□□ 1.18
NEK9-204ENST00000554258 RBM27Q9P2N5 1060 aaKnown RBP22.44■■□□□ 1.18
NEK9-204ENST00000554258 ECE2O60344 883 aa22.43■■□□□ 1.18
NEK9-204ENST00000554258 SLC10A5Q5PT55 438 aa22.43■■□□□ 1.18
NEK9-204ENST00000554258 DDX46Q7L014 1031 aaKnown RBP22.43■■□□□ 1.18
NEK9-204ENST00000554258 LRRC37AA6NMS7 1700 aa22.43■■□□□ 1.18
NEK9-204ENST00000554258 SCN9AQ15858 1988 aa22.42■■□□□ 1.18
NEK9-204ENST00000554258 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
NEK9-204ENST00000554258 PARP10Q53GL7 1025 aa22.42■■□□□ 1.18
NEK9-204ENST00000554258 GRAPQ13588 217 aa22.41■■□□□ 1.18
NEK9-204ENST00000554258 DOK7Q18PE1 504 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms