RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 ZNF594Q96JF6 807 aaPredicted RBP6.66□□□□□ -1.34
LINC00648-201ENST00000553747 C21orf2O43822 256 aa6.65□□□□□ -1.34
LINC00648-201ENST00000553747 MED26O95402 600 aa6.65□□□□□ -1.34
LINC00648-201ENST00000553747 LMOD1P29536 600 aaPredicted RBP6.65□□□□□ -1.34
LINC00648-201ENST00000553747 TXKP42681 527 aa6.65□□□□□ -1.34
LINC00648-201ENST00000553747 IGF2-ASQ6U949 168 aa6.65□□□□□ -1.34
LINC00648-201ENST00000553747 ZMYND15Q9H091 742 aa6.65□□□□□ -1.34
LINC00648-201ENST00000553747 GRNP28799 593 aaKnown RBP6.64□□□□□ -1.35
LINC00648-201ENST00000553747 IRAK1P51617 712 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 ELMSAN1Q6PJG2 1045 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 HFE2Q6ZVN8 426 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 SIX5Q8N196 739 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 DTWD1Q8N5C7 304 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 GAS2L2Q8NHY3 880 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 CHMP7Q8WUX9 453 aaPredicted RBP6.64□□□□□ -1.35
LINC00648-201ENST00000553747 VRTNQ9H8Y1 702 aa6.64□□□□□ -1.35
LINC00648-201ENST00000553747 LGR5O75473 907 aa6.63□□□□□ -1.35
LINC00648-201ENST00000553747 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
LINC00648-201ENST00000553747 FMNL2Q96PY5 1086 aa6.63□□□□□ -1.35
LINC00648-201ENST00000553747 ZFATQ9P243 1243 aa6.63□□□□□ -1.35
LINC00648-201ENST00000553747 OAS3Q9Y6K5 1087 aaKnown RBP6.63□□□□□ -1.35
LINC00648-201ENST00000553747 ATAD2Q6PL18 1390 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 M0R2N6 131 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 YBX3P16989 372 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00648-201ENST00000553747 CD97P48960 835 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 SEC13P55735 322 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
LINC00648-201ENST00000553747 SCG3Q8WXD2 468 aaKnown RBP6.62□□□□□ -1.35
LINC00648-201ENST00000553747 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
LINC00648-201ENST00000553747 AKTIPQ9H8T0 292 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 BCS1LQ9Y276 419 aa6.62□□□□□ -1.35
LINC00648-201ENST00000553747 DLL1O00548 723 aa6.61□□□□□ -1.35
LINC00648-201ENST00000553747 TARSP26639 723 aaKnown RBP6.61□□□□□ -1.35
LINC00648-201ENST00000553747 ERICH6Q7L0X2 663 aa6.61□□□□□ -1.35
LINC00648-201ENST00000553747 DHX32Q7L7V1 743 aaKnown RBP6.61□□□□□ -1.35
LINC00648-201ENST00000553747 DZIP1LQ8IYY4 767 aaKnown RBP6.61□□□□□ -1.35
LINC00648-201ENST00000553747 C2orf49Q9BVC5 232 aaPredicted RBP6.61□□□□□ -1.35
LINC00648-201ENST00000553747 EFCC1Q9HA90 598 aa6.61□□□□□ -1.35
LINC00648-201ENST00000553747 FRRS1LQ9P0K9 344 aa6.61□□□□□ -1.35
LINC00648-201ENST00000553747 DMGDHQ9UI17 866 aaKnown RBP6.61□□□□□ -1.35
LINC00648-201ENST00000553747 SASH3O75995 380 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 TGFB1P01137 390 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 RFX1P22670 979 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 PTK7Q13308 1070 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 CRTC2Q53ET0 693 aaPredicted RBP6.6□□□□□ -1.35
LINC00648-201ENST00000553747 CFAP70Q5T0N1 1121 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 AGGF1Q8N302 714 aaeCLIP6.6□□□□□ -1.35
LINC00648-201ENST00000553747 IFT43Q96FT9 208 aa6.6□□□□□ -1.35
LINC00648-201ENST00000553747 FAM196BA6NMK8 535 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L10C9JJH3 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L12C9JPN9 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L21D6R901 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 DKK1O94907 266 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 GP2P55259 537 aaKnown RBP6.59□□□□□ -1.35
LINC00648-201ENST00000553747 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 DPYDQ12882 1025 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 HINFPQ9BQA5 517 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
LINC00648-201ENST00000553747 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
LINC00648-201ENST00000553747 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 ADAMTS4O75173 837 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 RARAP10276 462 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 EIF2AK2P19525 551 aaKnown RBP6.58□□□□□ -1.36
LINC00648-201ENST00000553747 IDH3AP50213 366 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 HIF1AQ16665 826 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 TRPM4Q8TD43 1214 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
LINC00648-201ENST00000553747 J3QW42 95 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 PCSK7Q16549 785 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 CDCA8Q53HL2 280 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 IER5Q5VY09 327 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 GDF6Q6KF10 455 aaPredicted RBP6.57□□□□□ -1.36
LINC00648-201ENST00000553747 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
LINC00648-201ENST00000553747 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 RAXQ9Y2V3 346 aa6.57□□□□□ -1.36
LINC00648-201ENST00000553747 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
LINC00648-201ENST00000553747 IGLV1-40P01703 118 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 GLB1P16278 677 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 INPP5BP32019 993 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 GPLD1P80108 840 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 RTN1Q16799 776 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 TTC9Q92623 222 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 CCDC97Q96F63 343 aaPredicted RBP6.56□□□□□ -1.36
LINC00648-201ENST00000553747 TIMELESSQ9UNS1 1208 aa6.56□□□□□ -1.36
LINC00648-201ENST00000553747 STAG2Q8N3U4 1231 aa6.55□□□□□ -1.36
LINC00648-201ENST00000553747 IL22RA1Q8N6P7 574 aa6.55□□□□□ -1.36
LINC00648-201ENST00000553747 FAM200AQ8TCP9 573 aa6.55□□□□□ -1.36
LINC00648-201ENST00000553747 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
LINC00648-201ENST00000553747 KIAA1324LA8MWY0 1029 aaPredicted RBP6.54□□□□□ -1.36
LINC00648-201ENST00000553747 EPB42P16452 691 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms