RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 DESI1Q6ICB0 168 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 LYPD8Q6UX82 237 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 CARD10Q9BWT7 1032 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 UNC93B1Q9H1C4 597 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
VIPAS39-205ENST00000553691 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 PKDCCQ504Y2 493 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 TOM1L2Q6ZVM7 507 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 MAP3K19Q56UN5 1328 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 TNS2Q63HR2 1409 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 NSD3Q9BZ95 1437 aa8.96□□□□□ -0.98
VIPAS39-205ENST00000553691 HSPA5P11021 654 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 PTF1AQ7RTS3 328 aa8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 MARCH10Q8NA82 808 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 BAP1Q92560 729 aa8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 CCDC7Q96M83 1385 aa8.95□□□□□ -0.98
VIPAS39-205ENST00000553691 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 WNT7AO00755 349 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 ANKRD24Q8TF21 1146 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 IP6K1Q92551 441 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 GGNBP2Q9H3C7 697 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 RTL1A6NKG5 1358 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 NHSQ6T4R5 1651 aa8.94□□□□□ -0.98
VIPAS39-205ENST00000553691 HOXC9P31274 260 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 SH3BP2P78314 561 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 CDCA8Q53HL2 280 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 COG3Q96JB2 828 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 COL24A1Q17RW2 1714 aa8.93□□□□□ -0.98
VIPAS39-205ENST00000553691 MEGF6O75095 1541 aa8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 WNT7BP56706 349 aa8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 DNAJC5GQ8N7S2 189 aa8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
VIPAS39-205ENST00000553691 J3QL48 77 aa8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 DGAT1O75907 488 aa8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 F12P00748 615 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 CENPBP07199 599 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 CSB-PGBD3P0DP91 1061 aa8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 WWC3Q9ULE0 1092 aa8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 MAP2P11137 1827 aaKnown RBP8.91□□□□□ -0.98
VIPAS39-205ENST00000553691 INSRP06213 1382 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 KIF24Q5T7B8 1368 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 BTAF1O14981 1849 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 EXOC5O00471 708 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 ST8SIA5O15466 376 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
VIPAS39-205ENST00000553691 PAPPAQ13219 1627 aa8.9□□□□□ -0.99
VIPAS39-205ENST00000553691 SMG6Q86US8 1419 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 PKD1L3Q7Z443 1732 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 DOT1LQ8TEK3 1739 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 AP1G2O75843 785 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 IL2RBP14784 551 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 YBX3P16989 372 aaKnown RBP eCLIP8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 ZNF511Q8NB15 262 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 SNIP1Q8TAD8 396 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 LRRN4Q8WUT4 740 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 TFCP2L1Q9NZI6 479 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
VIPAS39-205ENST00000553691 FLT4P35916 1363 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 SMPD1P17405 629 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 NBPF6Q5VWK0 638 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 FOXJ1Q92949 421 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 LTV1Q96GA3 475 aaPredicted RBP8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 NBPF4Q96M43 638 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 TOGARAM1Q9Y4F4 1720 aa8.88□□□□□ -0.99
VIPAS39-205ENST00000553691 ADCY9O60503 1353 aa8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 NSD2O96028 1365 aa8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 KIF7Q2M1P5 1343 aa8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 AMPHP49418 695 aa8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 PANK3Q9H999 370 aa8.87□□□□□ -0.99
VIPAS39-205ENST00000553691 CGNL1Q0VF96 1302 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 LY75O60449 1722 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 ZNF827Q17R98 1081 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 PPP2R2DQ66LE6 453 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 ACSBG1Q96GR2 724 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 POLKQ9UBT6 870 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
VIPAS39-205ENST00000553691 WASHC2AQ641Q2 1341 aa8.85□□□□□ -0.99
VIPAS39-205ENST00000553691 TOMM70O94826 608 aa8.85□□□□□ -0.99
VIPAS39-205ENST00000553691 USHBP1Q8N6Y0 703 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms