RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-205ENST00000553609 SUPT20HQ8NEM7 779 aa18.71■□□□□ 0.59
NEDD1-205ENST00000553609 HHIPL1Q96JK4 782 aa18.71■□□□□ 0.59
NEDD1-205ENST00000553609 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
NEDD1-205ENST00000553609 YDJCA8MPS7 323 aa18.7■□□□□ 0.58
NEDD1-205ENST00000553609 CELF2O95319 508 aaKnown RBP18.7■□□□□ 0.58
NEDD1-205ENST00000553609 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
NEDD1-205ENST00000553609 TRPM4Q8TD43 1214 aa18.7■□□□□ 0.58
NEDD1-205ENST00000553609 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
NEDD1-205ENST00000553609 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
NEDD1-205ENST00000553609 RAD17O75943 681 aa18.69■□□□□ 0.58
NEDD1-205ENST00000553609 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
NEDD1-205ENST00000553609 MPNDQ8N594 471 aa18.69■□□□□ 0.58
NEDD1-205ENST00000553609 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
NEDD1-205ENST00000553609 BEGAINQ9BUH8 593 aa18.69■□□□□ 0.58
NEDD1-205ENST00000553609 SLC34A2O95436 690 aa18.68■□□□□ 0.58
NEDD1-205ENST00000553609 RGS19P49795 217 aa18.68■□□□□ 0.58
NEDD1-205ENST00000553609 GRAPQ13588 217 aa18.68■□□□□ 0.58
NEDD1-205ENST00000553609 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-205ENST00000553609 XAGE3Q8WTP9 111 aa18.68■□□□□ 0.58
NEDD1-205ENST00000553609 TMX4Q9H1E5 349 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-205ENST00000553609 BABAM1Q9NWV8 329 aa18.68■□□□□ 0.58
NEDD1-205ENST00000553609 COL4A1P02462 1669 aa18.67■□□□□ 0.58
NEDD1-205ENST00000553609 TCIRG1Q13488 830 aa18.67■□□□□ 0.58
NEDD1-205ENST00000553609 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
NEDD1-205ENST00000553609 TAF1P21675 1872 aa18.67■□□□□ 0.58
NEDD1-205ENST00000553609 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
NEDD1-205ENST00000553609 RIPK4P57078 832 aa18.66■□□□□ 0.58
NEDD1-205ENST00000553609 TNIP1Q15025 636 aa18.66■□□□□ 0.58
NEDD1-205ENST00000553609 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
NEDD1-205ENST00000553609 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
NEDD1-205ENST00000553609 CCDC85CA6NKD9 419 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 CA12O43570 354 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
NEDD1-205ENST00000553609 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 DLK2Q6UY11 383 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 DDX46Q7L014 1031 aaKnown RBP18.65■□□□□ 0.58
NEDD1-205ENST00000553609 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
NEDD1-205ENST00000553609 TRMT112Q9UI30 125 aaKnown RBP18.65■□□□□ 0.58
NEDD1-205ENST00000553609 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
NEDD1-205ENST00000553609 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
NEDD1-205ENST00000553609 TMPOP42166 694 aaKnown RBP18.64■□□□□ 0.57
NEDD1-205ENST00000553609 CDC37L1Q7L3B6 337 aa18.64■□□□□ 0.57
NEDD1-205ENST00000553609 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.57
NEDD1-205ENST00000553609 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
NEDD1-205ENST00000553609 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
NEDD1-205ENST00000553609 MCOLN1Q9GZU1 580 aa18.63■□□□□ 0.57
NEDD1-205ENST00000553609 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
NEDD1-205ENST00000553609 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-205ENST00000553609 EGFRP00533 1210 aa18.62■□□□□ 0.57
NEDD1-205ENST00000553609 DPF2Q92785 391 aa18.62■□□□□ 0.57
NEDD1-205ENST00000553609 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
NEDD1-205ENST00000553609 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
NEDD1-205ENST00000553609 TNRC18O15417 2968 aaPredicted RBP18.62■□□□□ 0.57
NEDD1-205ENST00000553609 CASP8AP2Q9UKL3 1982 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 PSMD14O00487 310 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 CHL1O00533 1208 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 MLLT1Q03111 559 aaPredicted RBP18.61■□□□□ 0.57
NEDD1-205ENST00000553609 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 USP48Q86UV5 1035 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 ISCA1Q9BUE6 129 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 CHPF2Q9P2E5 772 aa18.61■□□□□ 0.57
NEDD1-205ENST00000553609 RTL9Q8NET4 1388 aa18.6■□□□□ 0.57
NEDD1-205ENST00000553609 H7C1D1 291 aa18.6■□□□□ 0.57
NEDD1-205ENST00000553609 NOGQ13253 232 aa18.6■□□□□ 0.57
NEDD1-205ENST00000553609 SF3B3Q15393 1217 aaKnown RBP18.6■□□□□ 0.57
NEDD1-205ENST00000553609 POLLQ9UGP5 575 aa18.6■□□□□ 0.57
NEDD1-205ENST00000553609 FAM155AB1AL88 458 aaPredicted RBP18.59■□□□□ 0.57
NEDD1-205ENST00000553609 HUNKP57058 714 aa18.59■□□□□ 0.57
NEDD1-205ENST00000553609 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
NEDD1-205ENST00000553609 PLBD2Q8NHP8 589 aa18.59■□□□□ 0.57
NEDD1-205ENST00000553609 DBNDD1Q9H9R9 158 aa18.59■□□□□ 0.57
NEDD1-205ENST00000553609 GPSM2P81274 684 aa18.58■□□□□ 0.56
NEDD1-205ENST00000553609 WASHC4Q2M389 1173 aa18.58■□□□□ 0.56
NEDD1-205ENST00000553609 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
NEDD1-205ENST00000553609 KCNQ5Q9NR82 932 aa18.58■□□□□ 0.56
NEDD1-205ENST00000553609 NSFL1CQ9UNZ2 370 aaKnown RBP18.58■□□□□ 0.56
NEDD1-205ENST00000553609 TBC1D10BQ4KMP7 808 aaPredicted RBP18.57■□□□□ 0.56
NEDD1-205ENST00000553609 TRIM35Q9UPQ4 493 aa18.57■□□□□ 0.56
NEDD1-205ENST00000553609 SCN9AQ15858 1988 aa18.56■□□□□ 0.56
NEDD1-205ENST00000553609 ADM5C9JUS6 153 aa18.56■□□□□ 0.56
NEDD1-205ENST00000553609 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
NEDD1-205ENST00000553609 RPS12P25398 132 aaKnown RBP18.56■□□□□ 0.56
NEDD1-205ENST00000553609 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
NEDD1-205ENST00000553609 KRT26Q7Z3Y9 468 aa18.56■□□□□ 0.56
NEDD1-205ENST00000553609 GBA2Q9HCG7 927 aaPredicted RBP18.56■□□□□ 0.56
NEDD1-205ENST00000553609 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
NEDD1-205ENST00000553609 ECE2O60344 883 aa18.55■□□□□ 0.56
NEDD1-205ENST00000553609 HOXB7P09629 217 aa18.55■□□□□ 0.56
NEDD1-205ENST00000553609 DGKZQ13574 1117 aa18.55■□□□□ 0.56
NEDD1-205ENST00000553609 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
NEDD1-205ENST00000553609 C6orf229H3BNL8 230 aa18.54■□□□□ 0.56
NEDD1-205ENST00000553609 TRIM28Q13263 835 aaKnown RBP18.54■□□□□ 0.56
NEDD1-205ENST00000553609 DOK7Q18PE1 504 aa18.54■□□□□ 0.56
NEDD1-205ENST00000553609 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
NEDD1-205ENST00000553609 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
NEDD1-205ENST00000553609 TBC1D16Q8TBP0 767 aa18.54■□□□□ 0.56
NEDD1-205ENST00000553609 ASTN2O75129 1339 aaPredicted RBP18.53■□□□□ 0.56
NEDD1-205ENST00000553609 ZNF609O15014 1411 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms