RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
ATXN3-221ENST00000553498 NFATC2IPQ8NCF5 419 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 OSBPL3Q9H4L5 887 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
ATXN3-221ENST00000553498 PI4KAP2A4QPH2 592 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 KCNQ3O43525 872 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 OATP04181 439 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 DNAJB2P25686 324 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 CASC1Q6TDU7 716 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 PI4KAP1Q8N8J0 262 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 SSH3Q8TE77 659 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 TBC1D32Q96NH3 1257 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 ANP32EQ9BTT0 268 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 TEX13AQ9BXU3 409 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-221ENST00000553498 TMEM134Q9H6X4 195 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 THRAP3Q9Y2W1 955 aaKnown RBP9.03□□□□□ -0.96
ATXN3-221ENST00000553498 UTYO14607 1347 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 AOX1Q06278 1338 aa9.03□□□□□ -0.96
ATXN3-221ENST00000553498 PKD1L3Q7Z443 1732 aa9.02□□□□□ -0.96
ATXN3-221ENST00000553498 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
ATXN3-221ENST00000553498 ADCY9O60503 1353 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 TOM1O60784 492 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 MYT1Q01538 1121 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 LRRCC1Q9C099 1032 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
ATXN3-221ENST00000553498 PARP4Q9UKK3 1724 aaKnown RBP9.02□□□□□ -0.97
ATXN3-221ENST00000553498 COL15A1P39059 1388 aa9.01□□□□□ -0.97
ATXN3-221ENST00000553498 CDC45O75419 566 aa9.01□□□□□ -0.97
ATXN3-221ENST00000553498 TTC22Q5TAA0 569 aa9.01□□□□□ -0.97
ATXN3-221ENST00000553498 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
ATXN3-221ENST00000553498 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-221ENST00000553498 MAP3K2Q9Y2U5 619 aa9.01□□□□□ -0.97
ATXN3-221ENST00000553498 LRRFIP2Q9Y608 721 aaKnown RBP9.01□□□□□ -0.97
ATXN3-221ENST00000553498 COL22A1Q8NFW1 1626 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-221ENST00000553498 TNS2Q63HR2 1409 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
ATXN3-221ENST00000553498 RBM25P49756 843 aaKnown RBP9□□□□□ -0.97
ATXN3-221ENST00000553498 PPP4CP60510 307 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 ERC1Q8IUD2 1116 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 BTG4Q9NY30 223 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 C9orf78Q9NZ63 289 aaPredicted RBP9□□□□□ -0.97
ATXN3-221ENST00000553498 STAP2Q9UGK3 403 aa9□□□□□ -0.97
ATXN3-221ENST00000553498 DISP2A7MBM2 1401 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 GRM8O00222 908 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
ATXN3-221ENST00000553498 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 RIC3Q7Z5B4 369 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 KIF1BPQ96EK5 621 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 METTL22Q9BUU2 404 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-221ENST00000553498 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
ATXN3-221ENST00000553498 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-221ENST00000553498 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 SLC39A6Q13433 755 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 PPP1R42Q7Z4L9 355 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 TMOD3Q9NYL9 352 aa8.98□□□□□ -0.97
ATXN3-221ENST00000553498 COL14A1Q05707 1796 aaKnown RBP8.98□□□□□ -0.97
ATXN3-221ENST00000553498 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-221ENST00000553498 PNMA6EA0A0J9YXQ4 647 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 EXOC5O00471 708 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 IRF6O14896 467 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 SRGAP3O43295 1099 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 NBPF7P0C2Y1 421 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-221ENST00000553498 MX1P20591 662 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 APLP1P51693 650 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 PDE1AP54750 535 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 PROSER3Q2NL68 480 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 TBC1D9Q6ZT07 1266 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 COPS6Q7L5N1 327 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 XAGE3Q8WTP9 111 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
ATXN3-221ENST00000553498 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 SALL3Q9BXA9 1300 aa8.97□□□□□ -0.97
ATXN3-221ENST00000553498 N4BP2Q86UW6 1770 aaPredicted RBP8.96□□□□□ -0.97
ATXN3-221ENST00000553498 LRP6O75581 1613 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 NEURL1BA8MQ27 555 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 SURF6O75683 361 aaKnown RBP8.96□□□□□ -0.98
ATXN3-221ENST00000553498 ZMYND10O75800 440 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 REC8O95072 547 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 STARD3NLO95772 234 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 SLC10A3P09131 477 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 GSPT1P15170 499 aaKnown RBP8.96□□□□□ -0.98
ATXN3-221ENST00000553498 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
ATXN3-221ENST00000553498 GCKRQ14397 625 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 DDX54Q8TDD1 881 aaKnown RBP8.96□□□□□ -0.98
ATXN3-221ENST00000553498 GPATCH3Q96I76 525 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 USP16Q9Y5T5 823 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 ROBO1Q9Y6N7 1651 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 TTC41PQ6P2S7 1318 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms