RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	KAZALD1	Q96I82	304 aa		12.87	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	NOB1	Q9ULX3	412 aa	Known RBP	12.87	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	BCAR3	O75815	825 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CSF1R	P07333	972 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CTSW	P56202	376 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	GRAP	Q13588	217 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	TTLL11	Q8NHH1	800 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	GRAPL	Q8TC17	118 aa	Predicted RBP	12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CELF1	Q92879	486 aa	Known RBP	12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	RBM17	Q96I25	401 aa	Known RBP	12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	COL4A5	P29400	1685 aa		12.86	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CACNA1S	Q13698	1873 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	GRM8	O00222	908 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	PPEF1	O14829	653 aa	Predicted RBP	12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	FOXO4	P98177	505 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CCDC93	Q567U6	631 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	EPHA10	Q5JZY3	1008 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	SOGA3	Q5TF21	947 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	ARHGAP27	Q6ZUM4	889 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	SRCIN1	Q9C0H9	1055 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	TNN	Q9UQP3	1299 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	ATP6V0A2	Q9Y487	856 aa		12.85	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	BBOX1	O75936	387 aa		12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	TRIM27	P14373	513 aa		12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	CC2D2B	Q6DHV5	1058 aa		12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	API5	Q9BZZ5	524 aa	Known RBP	12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	USP44	Q9H0E7	712 aa		12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	SEC31B	Q9NQW1	1179 aa		12.84	□□□□□ -0.35
CALCOCO1-222	ENST00000553154	SBF1	O95248	1867 aa		12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	HSP90B1	P14625	803 aa	Known RBP	12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	HSPA6	P17066	643 aa		12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	INTS3	Q68E01	1043 aa	Known RBP	12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	SP8	Q8IXZ3	490 aa		12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	PSMD1	Q99460	953 aa		12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	GREM2	Q9H772	168 aa		12.83	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	LMNB1	P20700	586 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RABL6	Q3YEC7	729 aa	Predicted RBP	12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	CCDC152	Q4G0S7	254 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	C9orf131	Q5VYM1	1079 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	SLC4A10	Q6U841	1118 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ATF7IP	Q6VMQ6	1270 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	DDX46	Q7L014	1031 aa	Known RBP	12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	TMC4	Q7Z404	712 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ANKRD44	Q8N8A2	993 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	SUCLG2	Q96I99	432 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	TAOK3	Q9H2K8	898 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	TAF1	P21675	1872 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	TIAM2	Q8IVF5	1701 aa		12.82	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	CCT4	P50991	539 aa	Known RBP	12.81	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	FAM161A	Q3B820	660 aa		12.81	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	GRIPAP1	Q4V328	841 aa		12.81	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RTKN2	Q8IZC4	609 aa		12.81	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	MYH3	P11055	1940 aa		12.8	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RPS8	P62241	208 aa	Known RBP	12.8	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RNF181	Q9P0P0	153 aa		12.8	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	PCNT	O95613	3336 aa		12.8	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	RLBP1	P12271	317 aa		12.79	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.79	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	PODXL2	Q9NZ53	605 aa		12.79	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	IPO8	O15397	1037 aa	Known RBP	12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	CAPN15	O75808	1086 aa		12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ZKSCAN2	Q63HK3	967 aa		12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	DICER1	Q9UPY3	1922 aa	Known RBP	12.78	□□□□□ -0.36
CALCOCO1-222	ENST00000553154	ITGA6	P23229	1130 aa		12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	IARS	P41252	1262 aa	Known RBP	12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	GPSM2	P81274	684 aa		12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	LMBR1L	Q6UX01	489 aa		12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	CDC5L	Q99459	802 aa	Known RBP	12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	MEIS3	Q99687	375 aa		12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	BICC1	Q9H694	974 aa	Known RBP	12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	BSDC1	Q9NW68	430 aa	Predicted RBP	12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	IRS2	Q9Y4H2	1338 aa		12.77	□□□□□ -0.37
CALCOCO1-222	ENST00000553154		A0A1B0GUL6	1792 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	RFX5	P48382	616 aa	Predicted RBP	12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	ANKRD18A	Q8IVF6	992 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	MPND	Q8N594	471 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	TMEM57	Q8N5G2	664 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	FRAT1	Q92837	279 aa	Predicted RBP	12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	VPS33B	Q9H267	617 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	POLL	Q9UGP5	575 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	RCAN3	Q9UKA8	241 aa		12.76	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	FZD9	O00144	591 aa		12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	KIAA2012	Q0VF49	1180 aa		12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	MTX1	Q13505	466 aa		12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	DPP8	Q6V1X1	898 aa	Predicted RBP	12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	TBC1D16	Q8TBP0	767 aa		12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	MINPP1	Q9UNW1	487 aa		12.75	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	ZNF541	Q9H0D2	1346 aa		12.74	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	WTIP	A6NIX2	430 aa	Predicted RBP	12.74	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	CLUAP1	Q96AJ1	413 aa		12.74	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	WDR90	Q96KV7	1748 aa		12.74	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	XDH	P47989	1333 aa		12.73	□□□□□ -0.37
CALCOCO1-222	ENST00000553154	ANKRD18B	A2A2Z9	1011 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms