RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 PTH1RQ03431 593 aa10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 ITPK1Q13572 414 aa10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 DDX46Q7L014 1031 aaKnown RBP10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 A0A1B0GUL7 405 aa10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 PRPF40BQ6NWY9 871 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 TNPO1Q92973 898 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 SNX14Q9Y5W7 946 aa10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 ZNF609O15014 1411 aa10.96□□□□□ -0.65
RAB3IP-218ENST00000553099 MCM4P33991 863 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 KCNQ4P56696 695 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 VPS72Q15906 364 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 INTS5Q6P9B9 1019 aaKnown RBP10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 RASEFQ8IZ41 740 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 USP21Q9UK80 565 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 UBN2Q6ZU65 1347 aa10.96□□□□□ -0.66
RAB3IP-218ENST00000553099 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 ITGA6P23229 1130 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 RAB3GAP1Q15042 981 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 TMX3Q96JJ7 454 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 GREM2Q9H772 168 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 CIAO1O76071 339 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 FAM182BQ5T319 152 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 PLA2G12BQ9BX93 195 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 CDHR2Q9BYE9 1310 aa10.95□□□□□ -0.66
RAB3IP-218ENST00000553099 GOLIM4O00461 696 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 CHGBP05060 677 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 SSFA2P28290 1259 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 MCM2P49736 904 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 CTSWP56202 376 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 GSE1Q14687 1217 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 TTLL11Q8NHH1 800 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 HAUS7Q99871 368 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 CPA1P15085 419 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 LDHAL6AQ6ZMR3 332 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 ZNF589Q86UQ0 364 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 GPR108Q9NPR9 543 aa10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 RBM8AQ9Y5S9 174 aaKnown RBP10.94□□□□□ -0.66
RAB3IP-218ENST00000553099 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 CSF1RP07333 972 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 GBP4Q96PP9 640 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 CNNM1Q9NRU3 951 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 METTL24Q5JXM2 366 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 ZNF34Q8IZ26 560 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 JAKMIP1Q96N16 626 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 PAG1Q9NWQ8 432 aa10.93□□□□□ -0.66
RAB3IP-218ENST00000553099 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 PDE8AO60658 829 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 HCLS1P14317 486 aaPredicted RBP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 PKP1Q13835 747 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 TTC39AQ5SRH9 613 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 NIP7Q9Y221 180 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 AKAP2Q9Y2D5 859 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 MED23Q9ULK4 1368 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SH3TC1Q8TE82 1336 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 ADORA1P30542 326 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 CCDC158Q5M9N0 1113 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SUSD4Q5VX71 490 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 CCDC129Q6ZRS4 1044 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SPATA31A6Q5VVP1 1343 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 KBTBD3Q8NAB2 608 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 MAP4K1Q92918 833 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 XAGE2Q96GT9 111 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 CWC22Q9HCG8 908 aaKnown RBP10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
RAB3IP-218ENST00000553099 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 AK2P54819 239 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 NUCB2P80303 420 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 IL17RAQ96F46 866 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 UTP14AQ9BVJ6 771 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
RAB3IP-218ENST00000553099 RIC1Q4ADV7 1423 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms