RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 FZD9O00144 591 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMEM116-217ENST00000552801 RALBP1Q15311 655 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 CRY2Q49AN0 593 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
TMEM116-217ENST00000552801 CNTROBQ8N137 903 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
TMEM116-217ENST00000552801 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
TMEM116-217ENST00000552801 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-217ENST00000552801 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
TMEM116-217ENST00000552801 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
TMEM116-217ENST00000552801 MAP1SQ66K74 1059 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-217ENST00000552801 NECTIN2Q92692 538 aa11.35□□□□□ -0.59
TMEM116-217ENST00000552801 PLEKHF1Q96S99 279 aa11.35□□□□□ -0.59
TMEM116-217ENST00000552801 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
TMEM116-217ENST00000552801 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-217ENST00000552801 DEFB115Q30KQ5 88 aa11.34□□□□□ -0.59
TMEM116-217ENST00000552801 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
TMEM116-217ENST00000552801 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
TMEM116-217ENST00000552801 BABAM1Q9NWV8 329 aa11.34□□□□□ -0.59
TMEM116-217ENST00000552801 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
TMEM116-217ENST00000552801 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
TMEM116-217ENST00000552801 NTSR2O95665 410 aa11.33□□□□□ -0.6
TMEM116-217ENST00000552801 GRM1Q13255 1194 aa11.33□□□□□ -0.6
TMEM116-217ENST00000552801 DPP8Q6V1X1 898 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-217ENST00000552801 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
TMEM116-217ENST00000552801 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
TMEM116-217ENST00000552801 BBOX1O75936 387 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-217ENST00000552801 ECE1P42892 770 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 VEGFBP49765 207 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 MAP2K1Q02750 393 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-217ENST00000552801 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
TMEM116-217ENST00000552801 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-217ENST00000552801 VPS33BQ9H267 617 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
TMEM116-217ENST00000552801 ANXA1P04083 346 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
TMEM116-217ENST00000552801 AOC3Q16853 763 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 COPS6Q7L5N1 327 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 MPNDQ8N594 471 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 ABCC4O15439 1325 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
TMEM116-217ENST00000552801 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 FOXN1O15353 648 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 TIE1P35590 1138 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 TNIP1Q15025 636 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 ZNRF3Q9ULT6 936 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
TMEM116-217ENST00000552801 MYBBP1AQ9BQG0 1328 aaKnown RBP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
TMEM116-217ENST00000552801 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 G3V3G9 751 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-217ENST00000552801 EPS15P42566 896 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
TMEM116-217ENST00000552801 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 SCNN1DP51172 638 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 H7C1D1 291 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 PSEN1P49768 467 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 LBX1P52954 281 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 DDX10Q13206 875 aaKnown RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 GRAPQ13588 217 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
TMEM116-217ENST00000552801 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-217ENST00000552801 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-217ENST00000552801 RAD17O75943 681 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-217ENST00000552801 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
TMEM116-217ENST00000552801 CXCL9Q07325 125 aa11.27□□□□□ -0.61
TMEM116-217ENST00000552801 PDIA6Q15084 440 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms