RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
RFX4-210ENST00000552773 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 SLC27A2O14975 620 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 KBTBD3Q8NAB2 608 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
RFX4-210ENST00000552773 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
RFX4-210ENST00000552773 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
RFX4-210ENST00000552773 PCCAP05165 728 aaPredicted RBP12.4□□□□□ -0.42
RFX4-210ENST00000552773 FOXO4P98177 505 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 LRSAM1Q6UWE0 723 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
RFX4-210ENST00000552773 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
RFX4-210ENST00000552773 STRCQ7RTU9 1775 aa12.4□□□□□ -0.43
RFX4-210ENST00000552773 LRP6O75581 1613 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 UBE2HP62256 183 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 PTH1RQ03431 593 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
RFX4-210ENST00000552773 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
RFX4-210ENST00000552773 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 AK7Q96M32 723 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 DSCC1Q9BVC3 393 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 CTNNA3Q9UI47 895 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 CDHR2Q9BYE9 1310 aa12.39□□□□□ -0.43
RFX4-210ENST00000552773 TAF5LO75529 589 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 F13A1P00488 732 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 PKP1Q13835 747 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 IL25Q9H293 177 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
RFX4-210ENST00000552773 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 GLI3P10071 1580 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 SYT1P21579 422 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
RFX4-210ENST00000552773 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 NEUROD6Q96NK8 337 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
RFX4-210ENST00000552773 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
RFX4-210ENST00000552773 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
RFX4-210ENST00000552773 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
RFX4-210ENST00000552773 A1BGP04217 495 aa12.37□□□□□ -0.43
RFX4-210ENST00000552773 GJB2P29033 226 aa12.37□□□□□ -0.43
RFX4-210ENST00000552773 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
RFX4-210ENST00000552773 UVSSAQ2YD98 709 aa12.37□□□□□ -0.43
RFX4-210ENST00000552773 ARXQ96QS3 562 aa12.37□□□□□ -0.43
RFX4-210ENST00000552773 DNAJC2Q99543 621 aaKnown RBP12.37□□□□□ -0.43
RFX4-210ENST00000552773 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
RFX4-210ENST00000552773 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
RFX4-210ENST00000552773 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 EXOC5O00471 708 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 IFIT1P09914 478 aaKnown RBP12.36□□□□□ -0.43
RFX4-210ENST00000552773 KRT85P78386 507 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 FGD1P98174 961 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
RFX4-210ENST00000552773 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
RFX4-210ENST00000552773 TSPY26PQ9H489 355 aa12.36□□□□□ -0.43
RFX4-210ENST00000552773 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 TTLL7Q6ZT98 887 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 ZNF609O15014 1411 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 CLCN1P35523 988 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 GAS2L3Q86XJ1 694 aa12.35□□□□□ -0.43
RFX4-210ENST00000552773 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
RFX4-210ENST00000552773 ELP1O95163 1332 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 RNF113AO15541 343 aaKnown RBP12.34□□□□□ -0.43
RFX4-210ENST00000552773 CSF1RP07333 972 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 MCM5P33992 734 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
RFX4-210ENST00000552773 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms