RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 PNMA5Q96PV4 448 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP44-208ENST00000552440 NOVA2Q9UNW9 492 aaKnown RBP6.04□□□□□ -1.44
USP44-208ENST00000552440 ELNP15502 786 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 BTLAQ7Z6A9 289 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 CCER1Q8TC90 406 aaPredicted RBP6.04□□□□□ -1.44
USP44-208ENST00000552440 SREK1Q8WXA9 508 aaKnown RBP6.04□□□□□ -1.44
USP44-208ENST00000552440 PSMD1Q99460 953 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 C2orf49Q9BVC5 232 aaPredicted RBP6.04□□□□□ -1.44
USP44-208ENST00000552440 RTN1Q16799 776 aa6.03□□□□□ -1.44
USP44-208ENST00000552440 ZMYM1Q5SVZ6 1142 aa6.03□□□□□ -1.44
USP44-208ENST00000552440 BHMTQ93088 406 aa6.03□□□□□ -1.44
USP44-208ENST00000552440 UBE2OQ9C0C9 1292 aaKnown RBP6.03□□□□□ -1.44
USP44-208ENST00000552440 BCCIPQ9P287 314 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP44-208ENST00000552440 KIAA1024Q9UPX6 916 aa6.03□□□□□ -1.44
USP44-208ENST00000552440 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
USP44-208ENST00000552440 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 ALBP02768 609 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 NID1P14543 1247 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 SSFA2P28290 1259 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 C20orf204Q6ZNR8 217 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 TSEN2Q8NCE0 465 aaKnown RBP6.02□□□□□ -1.45
USP44-208ENST00000552440 SLAIN2Q9P270 581 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 CCINQ13939 588 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 CRTC2Q53ET0 693 aaPredicted RBP6.02□□□□□ -1.45
USP44-208ENST00000552440 DTWD1Q8N5C7 304 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
USP44-208ENST00000552440 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
USP44-208ENST00000552440 HSH2DQ96JZ2 352 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 C8orf37Q96NL8 207 aa6.02□□□□□ -1.45
USP44-208ENST00000552440 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L10C9JJH3 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L12C9JPN9 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L21D6R901 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L18D6R9N7 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L22D6RA61 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L17D6RBQ6 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L19D6RCP7 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L20D6RJB6 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 TGFBR3LH3BV60 316 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 IGFBP4P22692 258 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 FAM69CQ0P6D2 419 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 USP17L24Q0WX57 530 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 RSPO4Q2I0M5 234 aaPredicted RBP6.01□□□□□ -1.45
USP44-208ENST00000552440 SH3PXD2AQ5TCZ1 1133 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 HINFPQ9BQA5 517 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 SLC6A14Q9UN76 642 aa6.01□□□□□ -1.45
USP44-208ENST00000552440 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.01□□□□□ -1.45
USP44-208ENST00000552440 RGS9O75916 674 aaPredicted RBP6□□□□□ -1.45
USP44-208ENST00000552440 MAP3K6O95382 1288 aa6□□□□□ -1.45
USP44-208ENST00000552440 TCF3P15923 654 aa6□□□□□ -1.45
USP44-208ENST00000552440 PTK7Q13308 1070 aa6□□□□□ -1.45
USP44-208ENST00000552440 COL9A3Q14050 684 aaPredicted RBP6□□□□□ -1.45
USP44-208ENST00000552440 NKAPLQ5M9Q1 402 aa6□□□□□ -1.45
USP44-208ENST00000552440 DNAJC14Q6Y2X3 702 aaPredicted RBP6□□□□□ -1.45
USP44-208ENST00000552440 ZNF280CQ8ND82 737 aa6□□□□□ -1.45
USP44-208ENST00000552440 DCAF11Q8TEB1 546 aa6□□□□□ -1.45
USP44-208ENST00000552440 LENG1Q96BZ8 264 aaPredicted RBP6□□□□□ -1.45
USP44-208ENST00000552440 CHMP7Q8WUX9 453 aaPredicted RBP5.99□□□□□ -1.45
USP44-208ENST00000552440 VTI1AQ96AJ9 217 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 GSX2Q9BZM3 304 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 JPH1Q9HDC5 661 aaPredicted RBP5.99□□□□□ -1.45
USP44-208ENST00000552440 TPSG1Q9NRR2 321 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 BRPF3Q9ULD4 1205 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 C21orf2O43822 256 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 TICAM2Q86XR7 235 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 CLP1Q92989 425 aaKnown RBP5.99□□□□□ -1.45
USP44-208ENST00000552440 FRRS1LQ9P0K9 344 aa5.99□□□□□ -1.45
USP44-208ENST00000552440 A0A0A0MRY4 1105 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 SCO2A0A1W2PP80 73 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 DYRK3O43781 588 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 DKK1O94907 266 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 ADGRE1Q14246 886 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 TXNRD3Q86VQ6 643 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 NGLY1Q96IV0 654 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 IGFLR1Q9H665 355 aa5.98□□□□□ -1.45
USP44-208ENST00000552440 DNAJB12Q9NXW2 375 aaKnown RBP5.98□□□□□ -1.45
USP44-208ENST00000552440 ANKRD62A6NC57 917 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 SOWAHDA6NJG2 315 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 CLSTN1O94985 981 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 ERCC3P19447 782 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 NOM1Q5C9Z4 860 aaKnown RBP5.97□□□□□ -1.45
USP44-208ENST00000552440 RAB44Q7Z6P3 723 aaPredicted RBP5.97□□□□□ -1.45
USP44-208ENST00000552440 FAM200AQ8TCP9 573 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 UBXN4Q92575 508 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 TTC9Q92623 222 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 FOXO3O43524 673 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 GRIK4Q16099 956 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 PSAPL1Q6NUJ1 521 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 SLC51AQ86UW1 340 aa5.97□□□□□ -1.45
USP44-208ENST00000552440 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
USP44-208ENST00000552440 ZNF16P17020 682 aaPredicted RBP5.96□□□□□ -1.46
USP44-208ENST00000552440 ARSDP51689 593 aa5.96□□□□□ -1.46
USP44-208ENST00000552440 MBTPS1Q14703 1052 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms